RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 MLIPQ5VWP3 458 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 OR4K13Q8NH42 304 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 CHAC2Q8WUX2 184 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 NIPSNAP1Q9BPW8 284 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF385DQ9H6B1 395 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 C20orf202A1L168 122 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 CBY3A6NI87 242 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 CCDC85CA6NKD9 419 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 SYT7O43581 403 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 NSA2O95478 260 aaKnown RBP6.57□□□□□ -1.36
SMC1A-201ENST00000322213 RFC3P40938 356 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 STEAP1BQ6NZ63 245 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 NKAIN3Q8N8D7 197 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 TBC1D20Q96BZ9 403 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 GPR137Q96N19 417 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 ADARB2Q9NS39 739 aaKnown RBP6.57□□□□□ -1.36
SMC1A-201ENST00000322213 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.57□□□□□ -1.36
SMC1A-201ENST00000322213 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.57□□□□□ -1.36
SMC1A-201ENST00000322213 RAD1O60671 282 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 EOMESO95936 686 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 EPXP11678 715 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 SLC6A1P30531 599 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 MRPL19P49406 292 aaKnown RBP6.57□□□□□ -1.36
SMC1A-201ENST00000322213 TSPAN31Q12999 210 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 RBM39Q14498 530 aaKnown RBP6.57□□□□□ -1.36
SMC1A-201ENST00000322213 B3GNTL1Q67FW5 361 aaPredicted RBP6.57□□□□□ -1.36
SMC1A-201ENST00000322213 SLC24A5Q71RS6 500 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 OR2L13Q8N349 312 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 BPIFB2Q8N4F0 458 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 GLYATL2Q8WU03 294 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 BORCS7Q96B45 105 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 PDXPQ96GD0 296 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 ASIC5Q9NY37 505 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 C2orf78A6NCI8 922 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 PPP5D1E7EU14 171 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 DVL2O14641 736 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 H2BFMP0C1H6 154 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 GP1BBP13224 206 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 GNRHRP30968 328 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 CXADRP78310 365 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 GAB1Q13480 694 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 TP53I3Q53FA7 332 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 B3GNT9Q6UX72 402 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 GPR142Q7Z601 462 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 RNF113BQ8IZP6 322 aaKnown RBP6.57□□□□□ -1.36
SMC1A-201ENST00000322213 KHSRPQ92945 711 aaKnown RBP eCLIP6.57□□□□□ -1.36
SMC1A-201ENST00000322213 GAL3ST4Q96RP7 486 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 INTS14Q96SY0 518 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 ZAR1LA6NP61 321 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 TBX18O95935 607 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 LAP3P28838 519 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 SIRPAP78324 504 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 P4HA3Q7Z4N8 544 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 PPP1R3BQ86XI6 285 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 TRAM1L1Q8N609 369 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 AVL9Q8NBF6 648 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 BVESQ8NE79 360 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 SMIM4Q8WVI0 70 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 ZMYND19Q96E35 227 aaPredicted RBP6.57□□□□□ -1.36
SMC1A-201ENST00000322213 SCLYQ96I15 445 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 A0A1W2PQ45 241 aaPredicted RBP6.57□□□□□ -1.36
SMC1A-201ENST00000322213 A0A1W2PQY0 241 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 TUSC1Q2TAM9 212 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 TIGD5Q53EQ6 642 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 OR4C11Q6IEV9 310 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 TRAPPC6BQ86SZ2 158 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 COMMD1Q8N668 190 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 HPSE2Q8WWQ2 592 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 CSF3RQ99062 836 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 PRICKLE3O43900 615 aaPredicted RBP6.57□□□□□ -1.36
SMC1A-201ENST00000322213 SOD1P00441 154 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 PNMTP11086 282 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 SDHAP31040 664 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 CTHP32929 405 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 RPL23AP62750 156 aaKnown RBP6.57□□□□□ -1.36
SMC1A-201ENST00000322213 ALKBH1Q13686 389 aaKnown RBP6.57□□□□□ -1.36
SMC1A-201ENST00000322213 LRFN4Q6PJG9 635 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 B3GLCTQ6Y288 498 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 TMPRSS9Q7Z410 1059 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 ADGRE4PQ86SQ3 457 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF610Q8N9Z0 462 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 UBE2FQ969M7 185 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 ZCCHC4Q9H5U6 513 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 NRXN2Q9P2S2 1712 aa6.57□□□□□ -1.36
SMC1A-201ENST00000322213 NPIPA7E9PJI5 369 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 NDUFB2O95178 105 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 NPIPA8P0DM63 369 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 RBMS3Q6XE24 437 aaKnown RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 LIPIQ6XZB0 460 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 DCAF4L2Q8NA75 395 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 OR6T1Q8NGN1 323 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 TECTBQ96PL2 329 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 EDEM2Q9BV94 578 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 C1QTNF3Q9BXJ4 246 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ADAM19Q9H013 955 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 ZNF443Q9Y2A4 671 aaPredicted RBP6.56□□□□□ -1.36
SMC1A-201ENST00000322213 SLC31A2O15432 143 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 NME2P22392 152 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 REEP5Q00765 189 aa6.56□□□□□ -1.36
SMC1A-201ENST00000322213 MPPED2Q15777 294 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms