RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 BRINP1O60477 761 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 P04436 131 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 SLC2A5P22732 501 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 GIFP27352 417 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 PTH2RP49190 550 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 AP3S2P59780 193 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 SNRPGP62308 76 aaKnown RBP10.08□□□□□ -0.8
TOP3A-201ENST00000321105 SLC16A12Q6ZSM3 486 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.08□□□□□ -0.8
TOP3A-201ENST00000321105 CDH24Q86UP0 819 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 SLC7A5P1Q8MH63 180 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 SFXN2Q96NB2 322 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 THAP7Q9BT49 309 aaPredicted RBP10.08□□□□□ -0.8
TOP3A-201ENST00000321105 ZNF717Q9BY31 904 aaPredicted RBP10.08□□□□□ -0.8
TOP3A-201ENST00000321105 FKBP14Q9NWM8 211 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 TMEM269A0A1B0GVZ9 245 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 MEN1O00255 615 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 CD14P08571 375 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 GABRA5P31644 462 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 SRP9P49458 86 aaKnown RBP10.08□□□□□ -0.8
TOP3A-201ENST00000321105 EEF1A1P68104 462 aaKnown RBP10.08□□□□□ -0.8
TOP3A-201ENST00000321105 COL28A1Q2UY09 1125 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 LIPNQ5VXI9 398 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 GDPGP1Q6ZNW5 385 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 GLCCI1Q86VQ1 547 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 UEVLDQ8IX04 471 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 BATF2Q8N1L9 274 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 OR2L13Q8N349 312 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 OR1L3Q8NH93 324 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 PCNPQ8WW12 178 aaKnown RBP10.08□□□□□ -0.8
TOP3A-201ENST00000321105 SLC6A7Q99884 636 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 LMF2Q9BU23 707 aaKnown RBP10.08□□□□□ -0.8
TOP3A-201ENST00000321105 DUSP23Q9BVJ7 150 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 NUDT9Q9BW91 350 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 COLQQ9Y215 455 aaPredicted RBP10.08□□□□□ -0.8
TOP3A-201ENST00000321105 NPFFR2Q9Y5X5 522 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 A0A1B0GTH9 108 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 C17orf51A8MQB3 221 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 RBBP9O75884 186 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 LTBRP36941 435 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 RNF113BQ8IZP6 322 aaKnown RBP10.08□□□□□ -0.8
TOP3A-201ENST00000321105 OR5J2Q8NH18 312 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 PGAM5Q96HS1 289 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 SPACA5Q96QH8 159 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 HCAR1Q9BXC0 346 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 ENKD1Q9H0I2 346 aa10.08□□□□□ -0.8
TOP3A-201ENST00000321105 CCDC86Q9H6F5 360 aaKnown RBP10.08□□□□□ -0.8
TOP3A-201ENST00000321105 A0A0G2JMP0 313 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 A0A0X1KG70 313 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 C5orf51A6NDU8 294 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 OR2T1O43869 369 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 OR2J2O76002 312 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 CBX7O95931 251 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 LINC00271P0C7V0 271 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 POU4F2Q12837 409 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 ELAVL1Q15717 326 aaKnown RBP10.07□□□□□ -0.8
TOP3A-201ENST00000321105 HLA-BQ31612 363 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 YOD1Q5VVQ6 348 aaPredicted RBP10.07□□□□□ -0.8
TOP3A-201ENST00000321105 ABHD12BQ7Z5M8 362 aaPredicted RBP10.07□□□□□ -0.8
TOP3A-201ENST00000321105 KIF18BQ86Y91 864 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 LYSMD2Q8IV50 215 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 PLPP7Q8NBV4 271 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 OR4M2Q8NGB6 313 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 FCAMRQ8WWV6 532 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 NAT6Q93015 286 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 NECAB3Q96P71 396 aaPredicted RBP10.07□□□□□ -0.8
TOP3A-201ENST00000321105 BAIAP2Q9UQB8 552 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 TRPM7Q96QT4 1865 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 MEIOCA2RUB1 952 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 ISPDA4D126 451 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 CSTBP04080 98 aaKnown RBP10.07□□□□□ -0.8
TOP3A-201ENST00000321105 MAPK3P27361 379 aaPredicted RBP10.07□□□□□ -0.8
TOP3A-201ENST00000321105 CASRP41180 1078 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 PITPNBP48739 271 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 ZNF81P51508 661 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 BIDP55957 195 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 PRICKLE4Q2TBC4 344 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 CCDC80Q76M96 950 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 CADM3Q8N126 398 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 OR4C15Q8NGM1 316 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 KTI12Q96EK9 354 aaPredicted RBP10.07□□□□□ -0.8
TOP3A-201ENST00000321105 SLC25A44Q96H78 314 aaPredicted RBP10.07□□□□□ -0.8
TOP3A-201ENST00000321105 CCDC120Q96HB5 630 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 STACQ99469 402 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 SMLR1H3BR10 107 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 SURF4O15260 269 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 SYPP08247 313 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 PTHLHP12272 177 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 GLB1P16278 677 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 NUP62P37198 522 aaPredicted RBP10.07□□□□□ -0.8
TOP3A-201ENST00000321105 CRYBA2P53672 197 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 CCL7P80098 99 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 RPL18Q07020 188 aaKnown RBP10.07□□□□□ -0.8
TOP3A-201ENST00000321105 ABI3BPQ7Z7G0 1075 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 YIPF6Q96EC8 236 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 STRADBQ9C0K7 418 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 CHMP1AQ9HD42 196 aaPredicted RBP10.07□□□□□ -0.8
TOP3A-201ENST00000321105 ZNF701Q9NV72 531 aaPredicted RBP10.07□□□□□ -0.8
TOP3A-201ENST00000321105 PLEK2Q9NYT0 353 aa10.07□□□□□ -0.8
TOP3A-201ENST00000321105 ABI3Q9P2A4 366 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms