RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 DCTN6O00399 190 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 SSNA1O43805 119 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 GPANK1O95872 356 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 GDNFP39905 211 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 TEX19Q8NA77 164 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 DNAAF1Q8NEP3 725 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 HOXB13Q92826 284 aaPredicted RBP15.9■□□□□ 0.14
COL9A1-201ENST00000320755 ZNF524Q96C55 264 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 HYLS1Q96M11 299 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 GAL3ST4Q96RP7 486 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 SPRTNQ9H040 489 aaPredicted RBP15.9■□□□□ 0.14
COL9A1-201ENST00000320755 GHITMQ9H3K2 345 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 ING1Q9UK53 422 aaPredicted RBP15.9■□□□□ 0.14
COL9A1-201ENST00000320755 MMP17Q9ULZ9 603 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 SPATA2Q9UM82 520 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 ING4Q9UNL4 249 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 UNC13CQ8NB66 2214 aa15.9■□□□□ 0.14
COL9A1-201ENST00000320755 IGKV1D-42A0A075B6H8 117 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 ZNF879B4DU55 563 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 PPM1BO75688 479 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 TOXO94900 526 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 OR1D4P47884 311 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 MMP15P51511 669 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 GNG2P59768 71 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 GAS6Q14393 721 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 APOOLQ6UXV4 268 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 ZNF595Q8IYB9 648 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 ARHGEF39Q8N4T4 335 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 LSM14AQ8ND56 463 aaKnown RBP15.89■□□□□ 0.13
COL9A1-201ENST00000320755 ZNF563Q8TA94 476 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 SLC38A3Q99624 504 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 SYNDIG1Q9H7V2 258 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 RCE1Q9Y256 329 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 KLHDC2Q9Y2U9 406 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 PCDH15Q96QU1 1955 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 H2AFB2P0C5Z0 115 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 NKAIN2Q5VXU1 208 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 KIAA0895LQ68EN5 471 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 KANSL1Q7Z3B3 1105 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 LIX1LQ8IVB5 337 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 GIMAP1Q8WWP7 306 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 SCMH1Q96GD3 660 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 ADOQ96SZ5 270 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 NUBP2Q9Y5Y2 271 aa15.89■□□□□ 0.13
COL9A1-201ENST00000320755 ALG10Q5BKT4 473 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 STPG1Q5TH74 334 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 PRAMEF17Q5VTA0 474 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 SLITRK4Q8IW52 837 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 GFI1Q99684 422 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 LIN7BQ9HAP6 207 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 KLK11Q9UBX7 282 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 CAMK2AQ9UQM7 478 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 KHNYNO15037 678 aaKnown RBP15.88■□□□□ 0.13
COL9A1-201ENST00000320755 GMDSO60547 372 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 FCER2P06734 321 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 FAAP20Q6NZ36 180 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 OR11H4Q8NGC9 324 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 CEP76Q8TAP6 659 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 LMX1AQ8TE12 382 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 UCKL1Q9NWZ5 548 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 ZNF281Q9Y2X9 895 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 EML5Q05BV3 1969 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 CNTRLQ7Z7A1 2325 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 GATBO75879 557 aaKnown RBP15.88■□□□□ 0.13
COL9A1-201ENST00000320755 PROS1P07225 676 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 CENPAP49450 140 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 PSMD4P55036 377 aaKnown RBP15.88■□□□□ 0.13
COL9A1-201ENST00000320755 ST3GAL2Q16842 350 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 C9orf62Q8N4C0 152 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 OR52I2Q8NH67 350 aa15.88■□□□□ 0.13
COL9A1-201ENST00000320755 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.88■□□□□ 0.13
COL9A1-201ENST00000320755 RGP1Q92546 391 aaPredicted RBP15.88■□□□□ 0.13
COL9A1-201ENST00000320755 KTI12Q96EK9 354 aaPredicted RBP15.88■□□□□ 0.13
COL9A1-201ENST00000320755 NXF5Q9H1B4 397 aaKnown RBP15.88■□□□□ 0.13
COL9A1-201ENST00000320755 IGHV5-51A0A0C4DH38 117 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 IFITM5A6NNB3 132 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 SRPX2O60687 465 aaPredicted RBP15.87■□□□□ 0.13
COL9A1-201ENST00000320755 GLCEO94923 617 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 NUDT14O95848 222 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 ITPKBP27987 946 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 PRPS1P60891 318 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 SKP1P63208 163 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 GRM7Q14831 915 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 LIPNQ5VXI9 398 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 OVCH1Q7RTY7 1134 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 ZNF615Q8N8J6 731 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 DDOQ99489 341 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 OR10A4Q9H209 315 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 CDCP1Q9H5V8 836 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 SLCO1C1Q9NYB5 712 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 PCDHGA9Q9Y5G4 932 aaKnown RBP15.87■□□□□ 0.13
COL9A1-201ENST00000320755 C11orf98E9PRG8 122 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 ARPC3O15145 178 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 SSTR2P30874 369 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 GGTLC2Q14390 218 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 KLHL26Q53HC5 615 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 TMEM255AQ5JRV8 349 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 LINC01590Q5TEZ4 76 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 TTLL10Q6ZVT0 673 aa15.87■□□□□ 0.13
COL9A1-201ENST00000320755 C1orf216Q8TAB5 229 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms