RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 BPIFB2Q8N4F0 458 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 TRAM1L1Q8N609 369 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 PLPP7Q8NBV4 271 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 TMEM106AQ96A25 262 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 SLC6A18Q96N87 628 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 TEAD3Q99594 435 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 C1QTNF2Q9BXJ5 285 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 RXFP3Q9NSD7 469 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 PTTG3PQ9NZH4 202 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 A4GNTQ9UNA3 340 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 CAMK2AQ9UQM7 478 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 FAM96BQ9Y3D0 163 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 ASXL3Q9C0F0 2248 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 TEX13DA0A0J9YY54 714 aaPredicted RBP6.96□□□□□ -1.3
CDHR3-201ENST00000317716 TMEM82A0PJX8 343 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 C1orf226A1L170 272 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 LINC00862A6NCI5 91 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 SGK494L7N484 410 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 SYT5O00445 386 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 LY86O95711 162 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 GLI4P10075 376 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF30P17039 623 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 PI3P19957 117 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF10P21506 573 aaPredicted RBP6.96□□□□□ -1.3
CDHR3-201ENST00000317716 AGTR1P30556 359 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 CSF2RBP32927 897 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 ACTR1BP42025 376 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 ACTR1AP61163 376 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 ACTC1P68032 377 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 ACTA1P68133 377 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 SIRPAP78324 504 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 CAMK2DQ13557 499 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 AMZ1Q400G9 498 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 C12orf73Q69YU5 71 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 SLC29A4Q7RTT9 530 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 ADGRG3Q86Y34 549 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 LAS2Q8IYD9 372 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 NPRL2Q8WTW4 380 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 INTS14Q96SY0 518 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 SRMSQ9H3Y6 488 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 KCNK15Q9H427 330 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 STARD5Q9NSY2 213 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 ASB6Q9NWX5 421 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 ABRACLQ9P1F3 81 aa6.96□□□□□ -1.3
CDHR3-201ENST00000317716 MIA3Q5JRA6 1907 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 CACNA1DQ01668 2161 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 MEIKINA0A087WXM9 373 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 A0A1B0GTH9 108 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 A0A1W2PS29 197 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 MED19A0JLT2 244 aaPredicted RBP6.95□□□□□ -1.3
CDHR3-201ENST00000317716 B3GALT2O43825 422 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 MED6O75586 246 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 PRNPP04156 253 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 SBK2P0C263 348 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 ADRB3P13945 408 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 RORAP35398 523 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 FRKP42685 505 aaPredicted RBP6.95□□□□□ -1.3
CDHR3-201ENST00000317716 CTXN1P60606 82 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 DLX2Q07687 328 aaPredicted RBP6.95□□□□□ -1.3
CDHR3-201ENST00000317716 EBPQ15125 230 aaKnown RBP6.95□□□□□ -1.3
CDHR3-201ENST00000317716 OR1Q1Q15612 314 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 DEFB110Q30KQ9 67 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 C9orf152Q5JTZ5 239 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 BAIAP2L2Q6UXY1 529 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 TMEM91Q6ZNR0 172 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 GLB1L2Q8IW92 636 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 OR4K14Q8NGD5 310 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 FBLIM1Q8WUP2 373 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 YIPF5Q969M3 257 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 AMDHD1Q96NU7 426 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 SLC6A17Q9H1V8 727 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 SIRT4Q9Y6E7 314 aaPredicted RBP6.95□□□□□ -1.3
CDHR3-201ENST00000317716 SCN3AQ9NY46 2000 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 DOCK8Q8NF50 2099 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 PIKFYVEQ9Y2I7 2098 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 A8MVJ9 347 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF736B4DX44 427 aaPredicted RBP6.95□□□□□ -1.3
CDHR3-201ENST00000317716 TYRP1P17643 537 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 CPT2P23786 658 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 ATP5A1P25705 553 aaKnown RBP6.95□□□□□ -1.3
CDHR3-201ENST00000317716 ITGB7P26010 798 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 ZNF273Q14593 569 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 RBMS2Q15434 407 aaKnown RBP6.95□□□□□ -1.3
CDHR3-201ENST00000317716 P4HA3Q7Z4N8 544 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 TMEM150AQ86TG1 271 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 CBARPQ8N350 705 aaPredicted RBP6.95□□□□□ -1.3
CDHR3-201ENST00000317716 ANKRD53Q8N9V6 530 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 OR10H5Q8NGA6 315 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 OR52N1Q8NH53 320 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 RASD2Q96D21 266 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 NPAS1Q99742 590 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 FAM83CQ9BQN1 747 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 SLC46A2Q9BY10 475 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 SEC61A2Q9H9S3 476 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 SLC25A19Q9HC21 320 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 PHPT1Q9NRX4 125 aaPredicted RBP6.95□□□□□ -1.3
CDHR3-201ENST00000317716 SOHLH2Q9NX45 425 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 ASH2LQ9UBL3 628 aa6.95□□□□□ -1.3
CDHR3-201ENST00000317716 GPN3Q9UHW5 284 aaPredicted RBP6.95□□□□□ -1.3
CDHR3-201ENST00000317716 FBXL21Q9UKT6 434 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms