RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 KCTD20Q7Z5Y7 419 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 ZNF614Q8N883 585 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 ZPLD1Q8TCW7 415 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 RSC1A1Q92681 617 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 LMF2Q9BU23 707 aaKnown RBP17.48■□□□□ 0.39
RTN4-201ENST00000317610 IL23AQ9NPF7 189 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 CD93Q9NPY3 652 aa17.48■□□□□ 0.39
RTN4-201ENST00000317610 PLRG1O43660 514 aaKnown RBP17.47■□□□□ 0.39
RTN4-201ENST00000317610 CTNSO60931 367 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 NAGAP17050 411 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 MAGEB1P43366 347 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 MAP2K6P52564 334 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 ART1P52961 327 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 TAS2R20P59543 309 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 LINC01590Q5TEZ4 76 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 SLC6A19Q695T7 634 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 OR5M10Q6IEU7 315 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 STAC2Q6ZMT1 411 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 ZNF550Q7Z398 422 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 C12orf76Q8N812 135 aaPredicted RBP17.47■□□□□ 0.39
RTN4-201ENST00000317610 OR52R1Q8NGF1 315 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 FAM131CQ96AQ9 280 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 ZNF578Q96N58 590 aaPredicted RBP17.47■□□□□ 0.39
RTN4-201ENST00000317610 DPP7Q9UHL4 492 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 PCOLCE2Q9UKZ9 415 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 IMPA2O14732 288 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 SUSD5O60279 629 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 GLCEO94923 617 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 IGKV1D-16P01601 117 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 NMBP08949 121 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 CTRB1P17538 263 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 GPR143P51810 404 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 PSG6Q00889 435 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 CBFBQ13951 182 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 CTRB2Q6GPI1 263 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 FAAP20Q6NZ36 180 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 OVCH2Q7RTZ1 564 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 DNAAF1Q8NEP3 725 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 ANKRD9Q96BM1 317 aaPredicted RBP17.47■□□□□ 0.39
RTN4-201ENST00000317610 LINC00052Q96N35 136 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.47■□□□□ 0.39
RTN4-201ENST00000317610 OBP2AQ9NY56 170 aa17.47■□□□□ 0.39
RTN4-201ENST00000317610 EML5Q05BV3 1969 aa17.46■□□□□ 0.39
RTN4-201ENST00000317610 HMSDA8MTL9 139 aa17.46■□□□□ 0.39
RTN4-201ENST00000317610 PPM1BO75688 479 aa17.46■□□□□ 0.39
RTN4-201ENST00000317610 RGS11O94810 467 aa17.46■□□□□ 0.39
RTN4-201ENST00000317610 HIST1H2ABP04908 130 aa17.46■□□□□ 0.39
RTN4-201ENST00000317610 RPL4P36578 427 aaKnown RBP17.46■□□□□ 0.39
RTN4-201ENST00000317610 RUNX3Q13761 415 aa17.46■□□□□ 0.39
RTN4-201ENST00000317610 HLXQ14774 488 aaPredicted RBP17.46■□□□□ 0.39
RTN4-201ENST00000317610 CSRP2Q16527 193 aa17.46■□□□□ 0.39
RTN4-201ENST00000317610 ZNF776Q68DI1 518 aaPredicted RBP17.46■□□□□ 0.39
RTN4-201ENST00000317610 HIST3H2AQ7L7L0 130 aa17.46■□□□□ 0.39
RTN4-201ENST00000317610 DND1Q8IYX4 353 aaKnown RBP17.46■□□□□ 0.39
RTN4-201ENST00000317610 CA13Q8N1Q1 262 aa17.46■□□□□ 0.39
RTN4-201ENST00000317610 OR5T3Q8NGG3 340 aa17.46■□□□□ 0.39
RTN4-201ENST00000317610 FGF13Q92913 245 aa17.46■□□□□ 0.39
RTN4-201ENST00000317610 HIST1H2ACQ93077 130 aa17.46■□□□□ 0.39
RTN4-201ENST00000317610 ZFYVE21Q9BQ24 234 aa17.46■□□□□ 0.39
RTN4-201ENST00000317610 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.46■□□□□ 0.38
RTN4-201ENST00000317610 H0YGG7 62 aa17.46■□□□□ 0.38
RTN4-201ENST00000317610 PTHLHP12272 177 aa17.46■□□□□ 0.38
RTN4-201ENST00000317610 FCARP24071 287 aa17.46■□□□□ 0.38
RTN4-201ENST00000317610 ARF3P61204 181 aaPredicted RBP17.46■□□□□ 0.38
RTN4-201ENST00000317610 SEC61A1P61619 476 aaKnown RBP17.46■□□□□ 0.38
RTN4-201ENST00000317610 RPS4XP62701 263 aaKnown RBP17.46■□□□□ 0.38
RTN4-201ENST00000317610 ZNF141Q15928 474 aa17.46■□□□□ 0.38
RTN4-201ENST00000317610 PRRT3Q5FWE3 981 aa17.46■□□□□ 0.38
RTN4-201ENST00000317610 ZC3H14Q6PJT7 736 aaKnown RBP17.46■□□□□ 0.38
RTN4-201ENST00000317610 SLC36A1Q7Z2H8 476 aa17.46■□□□□ 0.38
RTN4-201ENST00000317610 OR6K6Q8NGW6 343 aa17.46■□□□□ 0.38
RTN4-201ENST00000317610 OR14C36Q8NHC7 312 aa17.46■□□□□ 0.38
RTN4-201ENST00000317610 HMGB4Q8WW32 186 aa17.46■□□□□ 0.38
RTN4-201ENST00000317610 PNPLA2Q96AD5 504 aa17.46■□□□□ 0.38
RTN4-201ENST00000317610 WDR89Q96FK6 387 aaPredicted RBP17.46■□□□□ 0.38
RTN4-201ENST00000317610 RBM18Q96H35 190 aaKnown RBP17.46■□□□□ 0.38
RTN4-201ENST00000317610 GPX7Q96SL4 187 aaPredicted RBP17.46■□□□□ 0.38
RTN4-201ENST00000317610 SHARPINQ9H0F6 387 aa17.46■□□□□ 0.38
RTN4-201ENST00000317610 TSPAN10Q9H1Z9 355 aaPredicted RBP17.46■□□□□ 0.38
RTN4-201ENST00000317610 C2orf16Q68DN1 1984 aa17.45■□□□□ 0.38
RTN4-201ENST00000317610 A0A087WUJ7 227 aa17.45■□□□□ 0.38
RTN4-201ENST00000317610 GLSO94925 669 aaPredicted RBP17.45■□□□□ 0.38
RTN4-201ENST00000317610 ADRA2CP18825 462 aa17.45■□□□□ 0.38
RTN4-201ENST00000317610 DLX5P56178 289 aa17.45■□□□□ 0.38
RTN4-201ENST00000317610 Q499Y3 187 aa17.45■□□□□ 0.38
RTN4-201ENST00000317610 TMEM81Q6P7N7 255 aa17.45■□□□□ 0.38
RTN4-201ENST00000317610 DGAT2L6Q6ZPD8 337 aa17.45■□□□□ 0.38
RTN4-201ENST00000317610 LRRTM1Q86UE6 522 aa17.45■□□□□ 0.38
RTN4-201ENST00000317610 OR1E3Q8WZA6 343 aa17.45■□□□□ 0.38
RTN4-201ENST00000317610 SLITRK2Q9H156 845 aa17.45■□□□□ 0.38
RTN4-201ENST00000317610 ACTR10Q9NZ32 417 aa17.45■□□□□ 0.38
RTN4-201ENST00000317610 ZNF337Q9Y3M9 751 aa17.45■□□□□ 0.38
RTN4-201ENST00000317610 TRBV5-5A0A0J9YX44 114 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 A8MUA0 341 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 NPIPB9F8W1W9 429 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 VSIG10L2P0DP72 767 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 S1PR1P21453 382 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 MAPK3P27361 379 aaPredicted RBP17.44■□□□□ 0.38
RTN4-201ENST00000317610 S100A11P31949 105 aa17.44■□□□□ 0.38
RTN4-201ENST00000317610 FAM53BQ14153 422 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms