RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 WDR89Q96FK6 387 aaPredicted RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 MRGPRX3Q96LB0 322 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF681Q96N22 645 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 OR1F2PQ96R84 312 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 PRDM7Q9NQW5 492 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 MRPL15Q9P015 296 aaKnown RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 NOSIPQ9Y314 301 aaKnown RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 COL11A1P12107 1806 aaPredicted RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 SGCEO43556 437 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 RNGTTO60942 597 aaKnown RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 ABOP16442 354 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 RPL4P36578 427 aaKnown RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 ADAM8P78325 824 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 LTBQ06643 244 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 PJVKQ0ZLH3 352 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 FAM189A2Q15884 450 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 UAP1L1Q3KQV9 507 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 LRRC73Q5JTD7 316 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 C11orf96Q7Z7L8 435 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 COX18Q8N8Q8 333 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 CYB561A3Q8NBI2 242 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 HCAR1Q9BXC0 346 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 C1orf198Q9H425 327 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 STEAP1Q9UHE8 339 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 ATG4BQ9Y4P1 393 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 TRAV18A0A075B6X5 111 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 A0A1B0GTI1 187 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 C1QTNF3-AMACRE9PGA6 284 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 VSIG10L2P0DP72 767 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 PPM1AP35813 382 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 FXYD6P3P58550 94 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 UBE2MP61081 183 aaKnown RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 COL19A1Q14993 1142 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 PEA15Q15121 130 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 C18orf63Q68DL7 685 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 C11orf87Q6NUJ2 197 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 ULK3Q6PHR2 472 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 ADAMTSL4Q6UY14 1074 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 USP53Q70EK8 1073 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 SYT9Q86SS6 491 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 GALNT16Q8N428 558 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 RELL2Q8NC24 303 aaPredicted RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 BPIFCQ8NFQ6 507 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 OR8D1Q8WZ84 308 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 ZMYND19Q96E35 227 aaPredicted RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF426Q9BUY5 554 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 QRSL1Q9H0R6 528 aaKnown RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 LINC00597Q9H2U6 94 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 LHX9Q9NQ69 397 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 WDR81Q562E7 1941 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 A0A0B4J2E0 115 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 A0A1B0GX12 115 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 PIN1P1O15428 100 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 CTSLP07711 333 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 LUMP51884 338 aaPredicted RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 PPP2CBP62714 309 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 UBE2IP63279 158 aaKnown RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 PPP2CAP67775 309 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 RNASE10Q5GAN6 216 aaKnown RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 MANEAQ5SRI9 462 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 FAM180BQ6P0A1 224 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 ATRAIDQ6UW56 229 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF836Q6ZNA1 936 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 PARS2Q7L3T8 475 aaKnown RBP4.39□□□□□ -1.71
PTPN13-201ENST00000316707 GABRG1Q8N1C3 465 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF619Q8N2I2 560 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 VN1R2Q8NFZ6 395 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 OR13C2Q8NGS9 318 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 OR5AK2Q8NH90 309 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 SDF2Q99470 211 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 CKLFQ9UBR5 152 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 CES1P1Q9UKY3 287 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 EDARQ9UNE0 448 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 WIF1Q9Y5W5 379 aa4.39□□□□□ -1.71
PTPN13-201ENST00000316707 TRBV5-5A0A0J9YX44 114 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 TMEM212A6NML5 194 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 TGM5O43548 720 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 PIP5K1CO60331 668 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 CYB5AP00167 134 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 OR4E1P0C645 316 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 FOLR2P14207 255 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 TBPP20226 339 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ITPKBP27987 946 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 CMPK1P30085 196 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 CX3CR1P49238 355 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 AIMP2Q13155 320 aaKnown RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ZNHIT3Q15649 155 aaPredicted RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 TMEM52BQ4KMG9 183 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 MEX3DQ86XN8 651 aaKnown RBP4.38□□□□□ -1.71
PTPN13-201ENST00000316707 COMMD1Q8N668 190 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 C15orf54Q8N8G6 183 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 STEAP2Q8NFT2 490 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 OR2L8Q8NGY9 312 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 RPS4Y2Q8TD47 263 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 GPX8Q8TED1 209 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 TCTEX1D2Q8WW35 142 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ZBTB8AQ96BR9 441 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 ZG16BQ96DA0 208 aa4.38□□□□□ -1.71
PTPN13-201ENST00000316707 MS4A3Q96HJ5 214 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms