RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 TAS2R20P59543 309 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 SEC61A1P61619 476 aaKnown RBP12.68□□□□□ -0.38
MKS1-201ENST00000313863 PLAURQ03405 335 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 MGAT2Q10469 447 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 COL9A2Q14055 689 aaPredicted RBP12.68□□□□□ -0.38
MKS1-201ENST00000313863 RBMS2Q15434 407 aaKnown RBP12.68□□□□□ -0.38
MKS1-201ENST00000313863 TMEM255AQ5JRV8 349 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 PXDC1Q5TGL8 231 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 FAM122CQ6P4D5 195 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 HIST3H2AQ7L7L0 130 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 OVCH2Q7RTZ1 564 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 NPEPL1Q8NDH3 523 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 OR51L1Q8NGJ5 315 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 PCNPQ8WW12 178 aaKnown RBP12.68□□□□□ -0.38
MKS1-201ENST00000313863 HIST1H2ACQ93077 130 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 CTHRC1Q96CG8 243 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 CCNL2Q96S94 520 aaPredicted RBP12.68□□□□□ -0.38
MKS1-201ENST00000313863 ZFYVE21Q9BQ24 234 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 LMF2Q9BU23 707 aaKnown RBP12.68□□□□□ -0.38
MKS1-201ENST00000313863 REG4Q9BYZ8 158 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 SLC19A3Q9BZV2 496 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 TBC1D29Q9UFV1 150 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 COPS3Q9UNS2 423 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 MOKQ9UQ07 419 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 MYO7AQ13402 2215 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 TBC1D3IA0A087WXS9 549 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 ARPC4-TTLL3A0A0A6YYG9 625 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 SELENOFO60613 162 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 CTSVO60911 334 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 CTNSO60931 367 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 RBBP9O75884 186 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 CDK2P24941 298 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 EMDP50402 254 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 DBPQ10586 325 aaPredicted RBP12.68□□□□□ -0.38
MKS1-201ENST00000313863 ENPP2Q13822 863 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 CBFBQ13951 182 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 DNM1P46Q6ZS02 220 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 SLC16A9Q7RTY1 509 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 ZNF227Q86WZ6 799 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 GLB1L2Q8IW92 636 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 SP7Q8TDD2 431 aaPredicted RBP12.68□□□□□ -0.38
MKS1-201ENST00000313863 PNPLA2Q96AD5 504 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 C12orf4Q9NQ89 552 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 ZC4H2Q9NQZ6 224 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 PCOLCE2Q9UKZ9 415 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 SLC6A5Q9Y345 797 aa12.68□□□□□ -0.38
MKS1-201ENST00000313863 CYR61O00622 381 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 PLRG1O43660 514 aaKnown RBP12.67□□□□□ -0.38
MKS1-201ENST00000313863 GLSO94925 669 aaPredicted RBP12.67□□□□□ -0.38
MKS1-201ENST00000313863 SLC35E2P0CK97 266 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 ATF4P18848 351 aaPredicted RBP12.67□□□□□ -0.38
MKS1-201ENST00000313863 GJA4P35212 333 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 WASP42768 502 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 SLC25A1P53007 311 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 KIAA1024LP59773 190 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 MPPED2Q15777 294 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 ZNF141Q15928 474 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 PRRT3Q5FWE3 981 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 FCRL6Q6DN72 434 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 RGS7BPQ6MZT1 257 aaPredicted RBP12.67□□□□□ -0.38
MKS1-201ENST00000313863 ZC3H14Q6PJT7 736 aaKnown RBP12.67□□□□□ -0.38
MKS1-201ENST00000313863 STAC2Q6ZMT1 411 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 JAZF1Q86VZ6 243 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 SERPINA12Q8IW75 414 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 DND1Q8IYX4 353 aaKnown RBP12.67□□□□□ -0.38
MKS1-201ENST00000313863 OR5AK2Q8NH90 309 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 OR14C36Q8NHC7 312 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 FLVCR1-AS1Q8TAF5 88 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 GPX7Q96SL4 187 aaPredicted RBP12.67□□□□□ -0.38
MKS1-201ENST00000313863 NMNAT3Q96T66 252 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 MNTQ99583 582 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 TTYH1Q9H313 450 aaPredicted RBP12.67□□□□□ -0.38
MKS1-201ENST00000313863 CDCP1Q9H5V8 836 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 FGF22Q9HCT0 170 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 CA10Q9NS85 328 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 ANKRD10Q9NXR5 420 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 PILRAQ9UKJ1 303 aa12.67□□□□□ -0.38
MKS1-201ENST00000313863 TP53BP1Q12888 1972 aaPredicted RBP12.67□□□□□ -0.38
MKS1-201ENST00000313863 A0A087WUJ7 227 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 ZNF860A6NHJ4 632 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 SUSD5O60279 629 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 OR10H2O60403 315 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 TSPAN9O75954 239 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 ZFPL1O95159 310 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 ANXA7P20073 488 aaKnown RBP12.66□□□□□ -0.38
MKS1-201ENST00000313863 IL32P24001 234 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 RUNX3Q13761 415 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 GK2Q14410 553 aaPredicted RBP12.66□□□□□ -0.38
MKS1-201ENST00000313863 HLXQ14774 488 aaPredicted RBP12.66□□□□□ -0.38
MKS1-201ENST00000313863 KIRREL2Q6UWL6 708 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 TMUB2Q71RG4 321 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 KRT77Q7Z794 578 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 ZNF440Q8IYI8 595 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 OR52R1Q8NGF1 315 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 ZNF417Q8TAU3 575 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 DOK4Q8TEW6 326 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 G6PC3Q9BUM1 346 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 C2orf42Q9NWW7 574 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 ACTR10Q9NZ32 417 aa12.66□□□□□ -0.38
MKS1-201ENST00000313863 CDV3Q9UKY7 258 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms