RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 NRTNQ99748 197 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 OR51M1Q9H341 326 aa16.58■□□□□ 0.24
SPSB4-201ENST00000310546 TRIOBPQ9H2D6 2365 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 NOTCH4Q99466 2003 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 FEZF1A0PJY2 475 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 ANKRD61A6NGH8 418 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 OR2T1O43869 369 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 RBBP9O75884 186 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 FARS2O95363 451 aaKnown RBP16.57■□□□□ 0.24
SPSB4-201ENST00000310546 EDNRAP25101 427 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 S100PP25815 95 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 MPIP34949 423 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 GPR143P51810 404 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 TAS2R20P59543 309 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 HTRA4P83105 476 aaPredicted RBP16.57■□□□□ 0.24
SPSB4-201ENST00000310546 FOXK2Q01167 660 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 CDK5R1Q15078 307 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 PWWP2BQ6NUJ5 590 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 CD180Q99467 661 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 TRMT61BQ9BVS5 477 aaKnown RBP16.57■□□□□ 0.24
SPSB4-201ENST00000310546 SGPP1Q9BX95 441 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 KLHL28Q9NXS3 571 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 OR5V1Q9UGF6 321 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 GNG8Q9UK08 70 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 OR5H14A6NHG9 310 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 UNC119BA6NIH7 251 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 EFCAB7A8K855 629 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 ZNF879B4DU55 563 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 BHLHE40O14503 412 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 PPM1DO15297 605 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 AGTR1P30556 359 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 CRMP1Q14194 572 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 HABP2Q14520 560 aaPredicted RBP16.57■□□□□ 0.24
SPSB4-201ENST00000310546 YOD1Q5VVQ6 348 aaPredicted RBP16.57■□□□□ 0.24
SPSB4-201ENST00000310546 THSD4Q6ZMP0 1018 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 Q6ZNB5 142 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 TMED4Q7Z7H5 227 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 UBE2E3Q969T4 207 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 C20orf141Q9NUB4 165 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 SIDT1Q9NXL6 827 aaKnown RBP16.57■□□□□ 0.24
SPSB4-201ENST00000310546 DTX4Q9Y2E6 619 aa16.57■□□□□ 0.24
SPSB4-201ENST00000310546 F5H0A9 414 aaPredicted RBP16.56■□□□□ 0.24
SPSB4-201ENST00000310546 FCMRO60667 390 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 OLFM2O95897 454 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 RHOP08100 348 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 C8orf89P0DMQ9 161 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 NAA10P41227 235 aaPredicted RBP16.56■□□□□ 0.24
SPSB4-201ENST00000310546 ANXA11P50995 505 aaKnown RBP16.56■□□□□ 0.24
SPSB4-201ENST00000310546 SIRPAP78324 504 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 NAA40Q86UY6 237 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 JAZF1Q86VZ6 243 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 GATCO43716 136 aaKnown RBP16.56■□□□□ 0.24
SPSB4-201ENST00000310546 PPT1P50897 306 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 CLDN2P57739 230 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 RBM39Q14498 530 aaKnown RBP16.56■□□□□ 0.24
SPSB4-201ENST00000310546 EIF2S3LQ2VIR3 472 aaKnown RBP16.56■□□□□ 0.24
SPSB4-201ENST00000310546 KRT77Q7Z794 578 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 CCDC116Q8IYX3 515 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 PFN4Q8NHR9 129 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 SNX33Q8WV41 574 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 DVL3Q92997 716 aaPredicted RBP16.56■□□□□ 0.24
SPSB4-201ENST00000310546 ZMYND19Q96E35 227 aaPredicted RBP16.56■□□□□ 0.24
SPSB4-201ENST00000310546 SEC22AQ96IW7 307 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.56■□□□□ 0.24
SPSB4-201ENST00000310546 LSM7Q9UK45 103 aaKnown RBP16.56■□□□□ 0.24
SPSB4-201ENST00000310546 PSMD9O00233 223 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 PIN1P1O15428 100 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 LATS1O95835 1130 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 ITPKBP27987 946 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 VIPR2P41587 438 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 FRKP42685 505 aaPredicted RBP16.56■□□□□ 0.24
SPSB4-201ENST00000310546 LMAN2Q12907 356 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 GLB1L2Q8IW92 636 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 KCNRGQ8N5I3 272 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 OR9A1PQ8NGU1 263 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 CYB5D2Q8WUJ1 264 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 CMTM3Q96MX0 182 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 ARHGDIGQ99819 225 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 ZNF337Q9Y3M9 751 aa16.56■□□□□ 0.24
SPSB4-201ENST00000310546 BCL2L11O43521 198 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 NARSO43776 548 aaKnown RBP16.55■□□□□ 0.24
SPSB4-201ENST00000310546 STATHP02808 62 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 MAKP20794 623 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 TMEM115Q12893 351 aaPredicted RBP16.55■□□□□ 0.24
SPSB4-201ENST00000310546 MPPED2Q15777 294 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 PLEKHN1Q494U1 663 aaPredicted RBP16.55■□□□□ 0.24
SPSB4-201ENST00000310546 OR51A7Q8NH64 312 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 PPP1R16AQ96I34 528 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 PAPOLGQ9BWT3 736 aaKnown RBP16.55■□□□□ 0.24
SPSB4-201ENST00000310546 V9GY05 133 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 MUC3AQ02505 3323 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 SDK1Q7Z5N4 2213 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 OR2AT4A6NND4 320 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 RIIAD1A6NNX1 92 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 KCNAB3O43448 404 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 IGHV2-70P01814 119 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 GTF2F2P13984 249 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 MRPS10P82664 201 aaKnown RBP16.55■□□□□ 0.24
SPSB4-201ENST00000310546 ECH1Q13011 328 aa16.55■□□□□ 0.24
SPSB4-201ENST00000310546 ARSIQ5FYB1 569 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms