RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 GRHPRQ9UBQ7 328 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 MRPS18CQ9Y3D5 142 aaKnown RBP20.29■□□□□ 0.84
IRF3-201ENST00000309877 HDGFL3Q9Y3E1 203 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 KCNMB2Q9Y691 235 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 PLPP3O14495 311 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 STSP08842 583 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.29■□□□□ 0.84
IRF3-201ENST00000309877 ITGADQ13349 1161 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 CRMP1Q14194 572 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 NEDD8Q15843 81 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 NADK2Q4G0N4 442 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 H1FNTQ75WM6 255 aaPredicted RBP20.29■□□□□ 0.84
IRF3-201ENST00000309877 GALNTL5Q7Z4T8 443 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 FAM83FQ8NEG4 500 aaPredicted RBP20.29■□□□□ 0.84
IRF3-201ENST00000309877 BBS1Q8NFJ9 593 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 INIPQ9NRY2 104 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 MED13Q9UHV7 2174 aa20.29■□□□□ 0.84
IRF3-201ENST00000309877 IMPA2O14732 288 aa20.28■□□□□ 0.84
IRF3-201ENST00000309877 ALDH3B2P48448 385 aa20.28■□□□□ 0.84
IRF3-201ENST00000309877 OR2B6P58173 313 aa20.28■□□□□ 0.84
IRF3-201ENST00000309877 PLGLB1Q02325 96 aa20.28■□□□□ 0.84
IRF3-201ENST00000309877 ZNF362Q5T0B9 420 aaPredicted RBP20.28■□□□□ 0.84
IRF3-201ENST00000309877 SATL1Q86VE3 508 aa20.28■□□□□ 0.84
IRF3-201ENST00000309877 CYB561A3Q8NBI2 242 aa20.28■□□□□ 0.84
IRF3-201ENST00000309877 SLC37A3Q8NCC5 494 aa20.28■□□□□ 0.84
IRF3-201ENST00000309877 SDR9C7Q8NEX9 313 aa20.28■□□□□ 0.84
IRF3-201ENST00000309877 SLC39A7Q92504 469 aa20.28■□□□□ 0.84
IRF3-201ENST00000309877 RASD2Q96D21 266 aa20.28■□□□□ 0.84
IRF3-201ENST00000309877 MED20Q9H944 212 aa20.28■□□□□ 0.84
IRF3-201ENST00000309877 MPDZO75970 2070 aa20.27■□□□□ 0.84
IRF3-201ENST00000309877 TEX13CA0A0J9YWL9 993 aa20.27■□□□□ 0.84
IRF3-201ENST00000309877 A0A1W2PNR3 127 aa20.27■□□□□ 0.84
IRF3-201ENST00000309877 SERPINI2O75830 405 aa20.27■□□□□ 0.84
IRF3-201ENST00000309877 SHC1P29353 583 aa20.27■□□□□ 0.84
IRF3-201ENST00000309877 C21orf33P30042 268 aaPredicted RBP20.27■□□□□ 0.84
IRF3-201ENST00000309877 SDHAP31040 664 aa20.27■□□□□ 0.84
IRF3-201ENST00000309877 MTNR1AP48039 350 aa20.27■□□□□ 0.84
IRF3-201ENST00000309877 RAC1P63000 192 aa20.27■□□□□ 0.84
IRF3-201ENST00000309877 TLE3Q04726 772 aa20.27■□□□□ 0.84
IRF3-201ENST00000309877 KLHL22Q53GT1 634 aa20.27■□□□□ 0.84
IRF3-201ENST00000309877 ZNF766Q5HY98 468 aa20.27■□□□□ 0.84
IRF3-201ENST00000309877 CCDC81Q6ZN84 652 aa20.27■□□□□ 0.84
IRF3-201ENST00000309877 JAZF1Q86VZ6 243 aa20.27■□□□□ 0.84
IRF3-201ENST00000309877 SMPDL3BQ92485 455 aa20.27■□□□□ 0.84
IRF3-201ENST00000309877 RNFT2Q96EX2 444 aa20.27■□□□□ 0.84
IRF3-201ENST00000309877 Q96M85 177 aa20.27■□□□□ 0.84
IRF3-201ENST00000309877 OR2B2Q9GZK3 357 aa20.27■□□□□ 0.84
IRF3-201ENST00000309877 CHST11Q9NPF2 352 aa20.27■□□□□ 0.84
IRF3-201ENST00000309877 GJE1A6NN92 205 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 HTR1FP30939 366 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 RFC3P40938 356 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 MEOX1P50221 254 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 B3GALT5-AS1P59052 145 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 EMX1Q04741 257 aaPredicted RBP20.26■□□□□ 0.83
IRF3-201ENST00000309877 KLHL12Q53G59 568 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 EMC4Q5J8M3 183 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 GPR139Q6DWJ6 353 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 FAM122BQ7Z309 247 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 TMEM178AQ8NBL3 297 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 LSM14AQ8ND56 463 aaKnown RBP20.26■□□□□ 0.83
IRF3-201ENST00000309877 PTP4A1Q93096 173 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 SFXN2Q96NB2 322 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 SIGLEC11Q96RL6 698 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 TTTY12Q9BZ98 90 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 ZNF346Q9UL40 294 aaKnown RBP20.26■□□□□ 0.83
IRF3-201ENST00000309877 TRAPPC4Q9Y296 219 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 B3GALT5Q9Y2C3 310 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 PCDHGB1Q9Y5G3 927 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 IRGMA1A4Y4 181 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 SULT2B1O00204 365 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 AKR7A3O95154 331 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 FADS2O95864 444 aaKnown RBP20.26■□□□□ 0.83
IRF3-201ENST00000309877 TXNDC12O95881 172 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 MAP2K4P45985 399 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 PUDPQ08623 228 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 C19orf57Q0VDD7 668 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 ZP4Q12836 540 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 WIPI1Q5MNZ9 446 aaPredicted RBP20.26■□□□□ 0.83
IRF3-201ENST00000309877 NIPAL3Q6P499 406 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 TMPPEQ6ZT21 453 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 MEPCEQ7L2J0 689 aaKnown RBP20.26■□□□□ 0.83
IRF3-201ENST00000309877 SCMH1Q96GD3 660 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 TMEM80Q96HE8 168 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 TSPAN32Q96QS1 320 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 HCAR1Q9BXC0 346 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 OR51V1Q9H2C8 321 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 ZNF703Q9H7S9 590 aaPredicted RBP20.26■□□□□ 0.83
IRF3-201ENST00000309877 COMMD3-BMI1R4GMX3 469 aa20.26■□□□□ 0.83
IRF3-201ENST00000309877 A0A1W2PRG6 482 aa20.25■□□□□ 0.83
IRF3-201ENST00000309877 CEACAM4O75871 244 aa20.25■□□□□ 0.83
IRF3-201ENST00000309877 PLGP00747 810 aaPredicted RBP20.25■□□□□ 0.83
IRF3-201ENST00000309877 JUNBP17275 347 aaPredicted RBP20.25■□□□□ 0.83
IRF3-201ENST00000309877 PCMT1P22061 227 aa20.25■□□□□ 0.83
IRF3-201ENST00000309877 TNFSF10P50591 281 aa20.25■□□□□ 0.83
IRF3-201ENST00000309877 RPS7P62081 194 aaKnown RBP20.25■□□□□ 0.83
IRF3-201ENST00000309877 SLC35A1P78382 337 aa20.25■□□□□ 0.83
IRF3-201ENST00000309877 MVKQ03426 396 aa20.25■□□□□ 0.83
IRF3-201ENST00000309877 RAB40BQ12829 278 aa20.25■□□□□ 0.83
IRF3-201ENST00000309877 XAF1Q6GPH4 301 aa20.25■□□□□ 0.83
IRF3-201ENST00000309877 IGFL2Q6UWQ7 119 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms