RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 CYC1P08574 325 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 RAC1P63000 192 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 DSC2Q02487 901 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 SOHLH1Q5JUK2 328 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 BRICD5Q6PL45 260 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 ENPP6Q6UWR7 440 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 DRAM2Q6UX65 266 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 OR4N4Q8N0Y3 316 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 OR4M1Q8NGD0 313 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 OR5L2Q8NGL0 311 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 FAM216AQ8WUB2 273 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 PTP4A1Q93096 173 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 NXPE3Q969Y0 559 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 HMCESQ96FZ2 354 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 CTDSP1Q9GZU7 261 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 OR51I1Q9H343 314 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 TXNL4BQ9NX01 149 aaKnown RBP4.89□□□□□ -1.63
SCN1A-201ENST00000303395 FTSJ1Q9UET6 329 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 EVLQ9UI08 416 aaPredicted RBP4.89□□□□□ -1.63
SCN1A-201ENST00000303395 NDRG2Q9UN36 371 aaKnown RBP4.89□□□□□ -1.63
SCN1A-201ENST00000303395 HS3ST4Q9Y661 456 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 C2orf92A0A1B0GVN3 265 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 TMEM82A0PJX8 343 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 BEST1O76090 585 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 IGHEP01854 428 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 PTGER4P35408 488 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 NCBP2P52298 156 aaKnown RBP eCLIP4.89□□□□□ -1.632e-9■□□□□ 10.6
SCN1A-201ENST00000303395 WNT7BP56706 349 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 EVX2Q03828 476 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 PTPRCAPQ14761 206 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 PABPC1L2AQ5JQF8 200 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 ADGRE4PQ86SQ3 457 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 CALHM3Q86XJ0 350 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 LILRA2Q8N149 483 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 ARL14EPQ8N8R7 260 aaPredicted RBP4.89□□□□□ -1.63
SCN1A-201ENST00000303395 OR5L1Q8NGL2 311 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 OR10Z1Q8NGY1 313 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 OR4K15Q8NH41 348 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 TFGQ92734 400 aaPredicted RBP4.89□□□□□ -1.63
SCN1A-201ENST00000303395 HAS2Q92819 552 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 SPTSSAQ969W0 71 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 SLC41A2Q96JW4 573 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 PKP4Q99569 1192 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 NKX6-2Q9C056 277 aaPredicted RBP4.89□□□□□ -1.63
SCN1A-201ENST00000303395 TMLHEQ9NVH6 421 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 SSUH2Q9Y2M2 353 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 RFPL4AA6NLU0 287 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 RFPL4AL1F8VTS6 287 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 TOX4O94842 621 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 VTNP04004 478 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 EPHX1P07099 455 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 INHBBP09529 407 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 ELK4P28324 431 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 AQP1P29972 269 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 PCBD1P61457 104 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 RPS15P62841 145 aaKnown RBP4.89□□□□□ -1.63
SCN1A-201ENST00000303395 HBA1P69905 142 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 TGFBR3Q03167 851 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 RAB32Q13637 225 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 ELAVL3Q14576 367 aaKnown RBP4.89□□□□□ -1.63
SCN1A-201ENST00000303395 PSAPL1Q6NUJ1 521 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 TEX261Q6UWH6 196 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 VITQ6UXI7 678 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 WDR5BQ86VZ2 330 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 OR6K3Q8NGY3 331 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 OR1S1Q8NH92 325 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 ZBTB45Q96K62 511 aaPredicted RBP4.89□□□□□ -1.63
SCN1A-201ENST00000303395 C7orf34Q96L11 122 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 DMRTB1Q96MA1 342 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 ADAP2Q9NPF8 381 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 ZFP37Q9Y6Q3 630 aaPredicted RBP4.89□□□□□ -1.63
SCN1A-201ENST00000303395 U3KQ87 197 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 MUC4Q99102 2169 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 TMEM210A6NLX4 147 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 BCL2L11O43521 198 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 ZNF286BP0CG31 522 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 ADRB3P13945 408 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 MAKP20794 623 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 DIO3P55073 304 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 SH3BP2P78314 561 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 CAMK2BQ13554 666 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 OR8G1Q15617 311 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 IQCJQ1A5X6 159 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 OR52W1Q6IF63 320 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 CNKSR3Q6P9H4 555 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 FAM151BQ6UXP7 276 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 LURAP1LQ8IV03 231 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 TRMT61BQ9BVS5 477 aaKnown RBP4.89□□□□□ -1.63
SCN1A-201ENST00000303395 NMNAT1Q9HAN9 279 aaPredicted RBP4.89□□□□□ -1.63
SCN1A-201ENST00000303395 EXOGQ9Y2C4 368 aaKnown RBP4.89□□□□□ -1.63
SCN1A-201ENST00000303395 B4DXG7 233 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 ARPC3O15145 178 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 DEDDO75618 318 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 ACHEP22303 614 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 APLNRP35414 380 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 XCR1P46094 333 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 KCNJ3P48549 501 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 RPL23AP62750 156 aaKnown RBP4.89□□□□□ -1.63
SCN1A-201ENST00000303395 IRF9Q00978 393 aa4.89□□□□□ -1.63
SCN1A-201ENST00000303395 EGR3Q06889 387 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms