RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 ABHD6Q9BV23 337 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 CLCF1Q9UBD9 225 aa9.68□□□□□ -0.86
CLIP1-201ENST00000302528 BLACEA4D250 179 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 PRAMEF26H0Y7S4 382 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 OR10K2Q6IF99 312 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 Q6ZSR6 202 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 SYT9Q86SS6 491 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 TMEM163Q8TC26 289 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 M1APQ8TC57 530 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 ASB11Q8WXH4 323 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 TVP23CQ96ET8 276 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 GON7Q9BXV9 100 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 TMPRSS5Q9H3S3 457 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 ZCCHC4Q9H5U6 513 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 MRPS28Q9Y2Q9 187 aaKnown RBP9.67□□□□□ -0.86
CLIP1-201ENST00000302528 CDC14CA4D256 554 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 SLC9B1P1A6NJY1 282 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 FAM183AA6NL82 134 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 NME4O00746 187 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 PGGT1BP53609 377 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 GNB1P62873 340 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 EDDM3AQ14507 147 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 KIR2DS3Q14952 304 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 OPCMLQ14982 345 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 VAMP3Q15836 100 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 CD300LGQ6UXG3 332 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 OR5D18Q8NGL1 313 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 BRI3BPQ8WY22 251 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 YIPF5Q969M3 257 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 SLC35E1Q96K37 410 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 NDFIP1Q9BT67 221 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 C1GALT1Q9NS00 363 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 GAR1Q9NY12 217 aaKnown RBP9.67□□□□□ -0.86
CLIP1-201ENST00000302528 OSGIN1Q9UJX0 560 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 URGCP-MRPS24S4R325 110 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF840PA6NDX5 716 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 OR6C76A6NM76 312 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 OR2J3O76001 311 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 HPNP05981 417 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 ITGB8P26012 769 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 MMP12P39900 470 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 GABREP78334 506 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 PGGHGQ32M88 737 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 TMEM176BQ3YBM2 270 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-201ENST00000302528 ENTPD8Q5MY95 495 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 LYSMD4Q5XG99 296 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 OR8G2PQ6IF36 304 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 RPL22L1Q6P5R6 122 aaKnown RBP9.67□□□□□ -0.86
CLIP1-201ENST00000302528 LYPD4Q6UWN0 246 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 C11orf42Q8N5U0 333 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF454Q8N9F8 522 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 ACOT4Q8N9L9 421 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 FUBP1Q96AE4 644 aaKnown RBP9.67□□□□□ -0.86
CLIP1-201ENST00000302528 AMBRA1Q9C0C7 1298 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 DMRT3Q9NQL9 472 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 B3GAT1Q9P2W7 334 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 DNMT3BQ9UBC3 853 aaKnown RBP9.67□□□□□ -0.86
CLIP1-201ENST00000302528 YTHDF2Q9Y5A9 579 aaKnown RBP9.67□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF816-ZNF321PA0A0X1KG74 233 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 LRIT2A6NDA9 550 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 OR52A4PA6NMU1 304 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 SUSD5O60279 629 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 B3GALNT1O75752 331 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 ABHD16AO95870 558 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 IGHEP01854 428 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 F13BP05160 661 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 SCGB1C2P0DMR2 95 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 TM4SF1P30408 202 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF626Q68DY1 528 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 LIPIQ6XZB0 460 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 C1orf87Q8N0U7 546 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF321PQ8N8H1 164 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 NHLRC2Q8NBF2 726 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 L3HYPDHQ96EM0 354 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 SLC41A2Q96JW4 573 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 FAM103A1Q9BTL3 118 aaKnown RBP9.67□□□□□ -0.86
CLIP1-201ENST00000302528 APOOQ9BUR5 198 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 GALNT9Q9HCQ5 603 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 NOX4Q9NPH5 578 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 UBQLN4Q9NRR5 601 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 MED9Q9NWA0 146 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 TMEM59LQ9UK28 342 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF443Q9Y2A4 671 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-201ENST00000302528 MYH8P13535 1937 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 OR6C68A6NDL8 312 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 HSD17B6O14756 317 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 EFSO43281 561 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 ELK1P19419 428 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 ENPP1P22413 925 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 RELAQ04206 551 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 MFAP5Q13361 173 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 VEZF1Q14119 521 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 CDCA2Q69YH5 1023 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-201ENST00000302528 Q6ZTK2 550 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 GDPD3Q7L5L3 318 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 PPP1R3BQ86XI6 285 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 SEMA6DQ8NFY4 1073 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 ZFP90Q8TF47 636 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 BOD1Q96IK1 185 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 AKR1E2Q96JD6 320 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms