RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 B3GALT5Q9Y2C3 310 aa8.46□□□□□ -1.05
RFX3-201ENST00000302303 POLEQ07864 2286 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 UNC119BA6NIH7 251 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 MCIDASD6RGH6 385 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 CYTIPO60759 359 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 EDNRAP25101 427 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 SLC9A3P48764 834 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 ALDH3A2P51648 485 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 SLC16A1P53985 500 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 CSNK2A1P68400 391 aaPredicted RBP8.45□□□□□ -1.06
RFX3-201ENST00000302303 RFX4Q33E94 735 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 NSUN5P2Q63ZY6 315 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 ZNF585AQ6P3V2 769 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 C3P1Q6ZMU1 363 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 ZBTB49Q6ZSB9 765 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 NCCRP1Q6ZVX7 275 aaPredicted RBP8.45□□□□□ -1.06
RFX3-201ENST00000302303 FAM122BQ7Z309 247 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 OAFQ86UD1 273 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 ZGRF1Q86YA3 2104 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 PM20D2Q8IYS1 436 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 PARP8Q8N3A8 854 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 CLDN22Q8N7P3 220 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 C9orf106Q8NAJ2 232 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 MAGEE2Q8TD90 523 aaPredicted RBP8.45□□□□□ -1.06
RFX3-201ENST00000302303 ABHD3Q8WU67 409 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 EME1Q96AY2 570 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 MBOAT4Q96T53 435 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 C9orf16Q9BUW7 83 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 UCK2Q9BZX2 261 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 OR52D1Q9H346 318 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 RNF122Q9H9V4 155 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 CALHM2Q9HA72 323 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 IL20RAQ9UHF4 553 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 TINAGQ9UJW2 476 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 ZNF175Q9Y473 711 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 CORINQ9Y5Q5 1042 aa8.45□□□□□ -1.06
RFX3-201ENST00000302303 IGKV3D-15A0A087WSY6 115 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 A0A1W2PNV4 684 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 MBD3L4A6NDZ8 208 aaPredicted RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 MBD3L3A6NE82 208 aaPredicted RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 MBD3L5A6NJ08 208 aaPredicted RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 CD8B2A6NJW9 211 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 BLOC1S5-TXNDC5H3BN57 136 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 BHLHE40O14503 412 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 TRAF3IP2O43734 574 aaPredicted RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 EIF1BO60739 113 aaKnown RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 SOX14O95416 240 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 F13BP05160 661 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 TPOP07202 933 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 STSP08842 583 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 SAGP10523 405 aaPredicted RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 OSMP13725 252 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 ACVR2AP27037 513 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 IFNGR2P38484 337 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 PTDSS1P48651 473 aaKnown RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 ARHGDIAP52565 204 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 RPS3AP61247 264 aaKnown RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 EFNB1P98172 346 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 CDK5Q00535 292 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 TLE1Q04724 770 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 PMS2P3Q13401 168 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 MFSD13AQ14CX5 517 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 POU4F3Q15319 338 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 ACSM5Q6NUN0 579 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 CREB3L2Q70SY1 520 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 FCRLAQ7L513 359 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 GALNT5Q7Z7M9 940 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 IGFN1Q86VF2 1251 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 CDK20Q8IZL9 346 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 C10orf53Q8N6V4 93 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 ATG16L2Q8NAA4 619 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 NAXEQ8NCW5 288 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 OR4Q3Q8NH05 313 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 MBD3L2Q8NHZ7 208 aaPredicted RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 TXNDC15Q96J42 360 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 SAMD8Q96LT4 415 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 ZNF385AQ96PM9 386 aaKnown RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 DMRTA2Q96SC8 542 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 GPX7Q96SL4 187 aaPredicted RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 DDOQ99489 341 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 RBM4BQ9BQ04 359 aaKnown RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 RBM4Q9BWF3 364 aaKnown RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 TAPBPLQ9BX59 468 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 BCO1Q9HAY6 547 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 NRIP3Q9NQ35 241 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 PAQR5Q9NXK6 330 aaPredicted RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 KLHL13Q9P2N7 655 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 ALPK2Q86TB3 2170 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 WDR1O75083 606 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 SNAP29O95721 258 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 ADORA3P0DMS8 318 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 GLI4P10075 376 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 GABRA1P14867 456 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 ABOP16442 354 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 GSTM3P21266 225 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 CEACAM8P31997 349 aaPredicted RBP8.44□□□□□ -1.06
RFX3-201ENST00000302303 CA7P43166 264 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 UQCRFS1P47985 274 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 RUNX1T1Q06455 604 aa8.44□□□□□ -1.06
RFX3-201ENST00000302303 PUDPQ08623 228 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms