RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 NAA10P41227 235 aaPredicted RBP20.02■□□□□ 0.8
TPM4-201ENST00000300933 OR12D2P58182 307 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 E2F1Q01094 437 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 KLHL26Q53HC5 615 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 LINC00114Q6XXX2 140 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 ZNF782Q6ZMW2 699 aaPredicted RBP20.02■□□□□ 0.8
TPM4-201ENST00000300933 C16orf47Q6ZP98 133 aaPredicted RBP20.02■□□□□ 0.8
TPM4-201ENST00000300933 LANCL3Q6ZV70 420 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 TRILQ7L0X0 811 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 COMMD7Q86VX2 200 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 GPR135Q8IZ08 494 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 SLC2A12Q8TD20 617 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 PMM1Q92871 262 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 NUDT9Q9BW91 350 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 ABCG5Q9H222 651 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 CHRDQ9H2X0 955 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 NUDT15Q9NV35 164 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 K7ESF4 209 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 PEPDP12955 493 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 ACVR1BP36896 505 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 ERVK-25P63136 954 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 SLC3A1Q07837 685 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 IDNKQ5T6J7 187 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 RASD2Q96D21 266 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 SHDQ96IW2 340 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 NMNAT3Q96T66 252 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 CDX2Q99626 313 aaPredicted RBP20.02■□□□□ 0.8
TPM4-201ENST00000300933 TRAF4Q9BUZ4 470 aaPredicted RBP20.02■□□□□ 0.8
TPM4-201ENST00000300933 CTSFQ9UBX1 484 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 EPHA6Q9UF33 1036 aa20.02■□□□□ 0.8
TPM4-201ENST00000300933 CXCL3P19876 107 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 SRP9P49458 86 aaKnown RBP20.01■□□□□ 0.79
TPM4-201ENST00000300933 TAGLNQ01995 201 aaKnown RBP20.01■□□□□ 0.79
TPM4-201ENST00000300933 SERTAD2Q14140 314 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 METAP1DQ6UB28 335 aaPredicted RBP20.01■□□□□ 0.79
TPM4-201ENST00000300933 TMEM91Q6ZNR0 172 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 SGTBQ96EQ0 304 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 NDC1Q9BTX1 674 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 RNF32Q9H0A6 362 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 MKKSQ9NPJ1 570 aaPredicted RBP20.01■□□□□ 0.79
TPM4-201ENST00000300933 CPED1A4D0V7 1026 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 UTS2O95399 124 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 TFPIP10646 304 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 ZNF3P17036 446 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 HK1P19367 917 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 SLC6A1P30531 599 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 FGF9P31371 208 aaPredicted RBP20.01■□□□□ 0.79
TPM4-201ENST00000300933 BICRALQ6AI39 1079 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 TMEM65Q6PI78 240 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 ARIH2OSQ8N7S6 290 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 MOSPD2Q8NHP6 518 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 SMPDL3BQ92485 455 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 C4orf36Q96KX1 117 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 SYNDIG1Q9H7V2 258 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 ADGRL4Q9HBW9 690 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 FGF21Q9NSA1 209 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 BABAM2Q9NXR7 383 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 PRODH2Q9UF12 536 aa20.01■□□□□ 0.79
TPM4-201ENST00000300933 A0A087WUJ7 227 aa20■□□□□ 0.79
TPM4-201ENST00000300933 TSPAN4O14817 238 aa20■□□□□ 0.79
TPM4-201ENST00000300933 NUDT21O43809 227 aaKnown RBP20■□□□□ 0.79
TPM4-201ENST00000300933 DUX1O43812 170 aa20■□□□□ 0.79
TPM4-201ENST00000300933 DDAH2O95865 285 aa20■□□□□ 0.79
TPM4-201ENST00000300933 RAF1P04049 648 aa20■□□□□ 0.79
TPM4-201ENST00000300933 SBK2P0C263 348 aa20■□□□□ 0.79
TPM4-201ENST00000300933 NR0B1P51843 470 aaKnown RBP20■□□□□ 0.79
TPM4-201ENST00000300933 TMEM44Q2T9K0 475 aa20■□□□□ 0.79
TPM4-201ENST00000300933 RNASE12Q5GAN4 147 aaKnown RBP20■□□□□ 0.79
TPM4-201ENST00000300933 ARHGAP40Q5TG30 622 aa20■□□□□ 0.79
TPM4-201ENST00000300933 MZT2AQ6P582 158 aa20■□□□□ 0.79
TPM4-201ENST00000300933 PLXDC1Q8IUK5 500 aa20■□□□□ 0.79
TPM4-201ENST00000300933 C17orf47Q8NEP4 570 aa20■□□□□ 0.79
TPM4-201ENST00000300933 MOGAT1Q96PD6 335 aa20■□□□□ 0.79
TPM4-201ENST00000300933 C12orf10Q9HB07 376 aa20■□□□□ 0.79
TPM4-201ENST00000300933 TRDV1A0A1B0GX56 115 aa20■□□□□ 0.79
TPM4-201ENST00000300933 A0A1W2PPK0 400 aa20■□□□□ 0.79
TPM4-201ENST00000300933 PSMD9O00233 223 aa20■□□□□ 0.79
TPM4-201ENST00000300933 ICOSLGO75144 302 aa20■□□□□ 0.79
TPM4-201ENST00000300933 TSPAN9O75954 239 aa20■□□□□ 0.79
TPM4-201ENST00000300933 IFI6P09912 130 aa20■□□□□ 0.79
TPM4-201ENST00000300933 MST1P26927 711 aa20■□□□□ 0.79
TPM4-201ENST00000300933 SLC6A6P31641 620 aa20■□□□□ 0.79
TPM4-201ENST00000300933 BMPERQ8N8U9 685 aa20■□□□□ 0.79
TPM4-201ENST00000300933 GALNT11Q8NCW6 608 aa20■□□□□ 0.79
TPM4-201ENST00000300933 OR52N1Q8NH53 320 aa20■□□□□ 0.79
TPM4-201ENST00000300933 ADAMTS18Q8TE60 1221 aa20■□□□□ 0.79
TPM4-201ENST00000300933 DACT3Q96B18 629 aaPredicted RBP20■□□□□ 0.79
TPM4-201ENST00000300933 ZNF304Q9HCX3 659 aa20■□□□□ 0.79
TPM4-201ENST00000300933 IGKV1D-42A0A075B6H8 117 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 SOX30O94993 753 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 GLB1P16278 677 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 GRPRP30550 384 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 DHPSP49366 369 aaPredicted RBP19.99■□□□□ 0.79
TPM4-201ENST00000300933 SDR16C5Q8N3Y7 309 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 OR13C5Q8NGS8 318 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 ZNF721Q8TF20 911 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 TSSK2Q96PF2 358 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 THAP7Q9BT49 309 aaPredicted RBP19.99■□□□□ 0.79
TPM4-201ENST00000300933 UBQLN4Q9NRR5 601 aa19.99■□□□□ 0.79
TPM4-201ENST00000300933 ZMIZ1Q9ULJ6 1067 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms