RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 F5H5K5 113 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 SLC16A7O60669 478 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 TK1P04183 234 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 ACTR1BP42025 376 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 SLC6A14Q9UN76 642 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 MYOM1P52179 1685 aa10.98□□□□□ -0.65
SHROOM3-201ENST00000296043 CD1EP15812 388 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 SULT1A2P50226 295 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 PLGLB1Q02325 96 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 ARSIQ5FYB1 569 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 RPL7L1Q6DKI1 246 aaKnown RBP10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 FBXO17Q96EF6 278 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 SMIM12Q96EX1 92 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 F2RL3Q96RI0 385 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 BET1O15155 118 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 ZNF354AO60765 605 aaPredicted RBP10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 OR2A2Q6IF42 318 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 SLC16A10Q8TF71 515 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 OSBPL2Q9H1P3 480 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 SLX4Q8IY92 1834 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 H3BQ06 376 aaPredicted RBP10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 HSPB6O14558 160 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 HOXA9P31269 272 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 ACKR1Q16570 336 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 CXCL17Q6UXB2 119 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 MRGPRX2Q96LB1 330 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 LINC00052Q96N35 136 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 TMEM106CQ9BVX2 250 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 ZMAT3Q9HA38 289 aaKnown RBP10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 BET1LQ9NYM9 111 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 COL3A1P02461 1466 aaPredicted RBP10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 C17orf112F2Z3M2 114 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 RTCAO00442 366 aaKnown RBP10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 CHRNEQ04844 493 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 SAXO2Q658L1 398 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 OR51B6Q9H340 312 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 PTPRMP28827 1452 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 ZNF727A8MUV8 499 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 POP7O75817 140 aaKnown RBP10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 CBR3O75828 277 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 OTX2P32243 289 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 CTU2Q2VPK5 515 aaKnown RBP10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 SCML1Q9UN30 329 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 HOXC6P09630 235 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 JUNBP17275 347 aaPredicted RBP10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 C3orf38Q5JPI3 329 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 IFI44Q8TCB0 444 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 MS4A10Q96PG2 267 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 ABHD16BQ9H3Z7 469 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 CDH20Q9HBT6 801 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 ALDOCP09972 364 aaKnown RBP10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 C5AR1P21730 350 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 STEAP1BQ6NZ63 245 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 KIAA1324LA8MWY0 1029 aaPredicted RBP10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 BTNL8Q6UX41 500 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 ZNF573Q86YE8 665 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 MS4A7Q9GZW8 240 aaPredicted RBP10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 ACOXLQ9NUZ1 547 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 ELOVL2Q9NXB9 296 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 INTS1Q8N201 2190 aaKnown RBP10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 PKIAP61925 76 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 YOD1Q5VVQ6 348 aaPredicted RBP10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 MAMDC4Q6UXC1 1216 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 THAP3Q8WTV1 239 aaPredicted RBP10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 APIPQ96GX9 242 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 ZNF845Q96IR2 970 aaPredicted RBP10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 SMIM7Q9BQ49 75 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 CAMK2AQ9UQM7 478 aa10.97□□□□□ -0.65
SHROOM3-201ENST00000296043 ZNF541Q9H0D2 1346 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 DOK2O60496 412 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 APODP05090 189 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 SULT1A3P0DMM9 295 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 SULT1A4P0DMN0 295 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 ECH1Q13011 328 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 ZNF704Q6ZNC4 412 aaPredicted RBP10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 BTLAQ7Z6A9 289 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 LRRC25Q8N386 305 aaPredicted RBP10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 MMABQ96EY8 250 aaPredicted RBP10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 DUS3LQ96G46 650 aaKnown RBP10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 PTGES2Q9H7Z7 377 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 ZNF160Q9HCG1 818 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 ABI3Q9P2A4 366 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 IL36AQ9UHA7 158 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 AP1G1O43747 822 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 EMP2P54851 167 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 ARL16Q0P5N6 197 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 MSMO1Q15800 293 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 PGGHGQ32M88 737 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 RNASEKQ6P5S7 137 aaKnown RBP10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 MSI2Q96DH6 328 aaKnown RBP10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 LIN7CQ9NUP9 197 aaKnown RBP10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 SLCO3A1Q9UIG8 710 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 SPTA1P02549 2419 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 CLEC3AO75596 197 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 ARRB1P49407 418 aaPredicted RBP10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 CRYBB1P53674 252 aaPredicted RBP10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 PLP2Q04941 152 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 DOC2AQ14183 400 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 DHRS11Q6UWP2 260 aa10.96□□□□□ -0.65
SHROOM3-201ENST00000296043 BCDIN3DQ7Z5W3 292 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms