RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 IGF2P01344 180 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 PGCP20142 388 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 CFL1P23528 166 aaKnown RBP12.72□□□□□ -0.37
NXF1-201ENST00000294172 LCN1P31025 176 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 SDHAP31040 664 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 EVI2BP34910 448 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 CASP3P42574 277 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 CAPZA2P47755 286 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 EVX1P49640 407 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 GDI2P50395 445 aaKnown RBP12.72□□□□□ -0.37
NXF1-201ENST00000294172 PNLIPRP2P54317 469 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 RNF4P78317 190 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 SIRPAP78324 504 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 NKAIN1Q4KMZ8 207 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 OR5M10Q6IEU7 315 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 PWWP2BQ6NUJ5 590 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 Q8N402 240 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 SAP25Q8TEE9 199 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 THAP4Q8WY91 577 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 SLC25A36Q96CQ1 311 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 GUCD1Q96NT3 240 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 LY6G6EA0A0G2JKS1 128 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 TRBV2A0A0J9YWF9 115 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 A0A1B0GTQ1 180 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 A0A1W2PPC1 479 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 IDSB3KWA1 339 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 EIF4E2O60573 245 aaKnown RBP12.72□□□□□ -0.37
NXF1-201ENST00000294172 SLC2A2P11168 524 aaPredicted RBP12.72□□□□□ -0.37
NXF1-201ENST00000294172 GP1BBP13224 206 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 EDNRAP25101 427 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 UQCRC1P31930 480 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 CDK5R1Q15078 307 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 CDONQ4KMG0 1287 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 HBMQ6B0K9 141 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 RABEPKQ7Z6M1 372 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 SYS1Q8N2H4 156 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 MS4A15Q8N5U1 240 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 ZNF441Q8N8Z8 693 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 DTX3Q8N9I9 347 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 IL17RDQ8NFM7 739 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 DUSP19Q8WTR2 217 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 SMIM19Q96E16 107 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 RASD1Q9Y272 281 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 RBMX2Q9Y388 322 aaKnown RBP12.72□□□□□ -0.37
NXF1-201ENST00000294172 U3KQA8 63 aa12.72□□□□□ -0.37
NXF1-201ENST00000294172 NUP210LQ5VU65 1888 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 IGHV5-10-1A0A0J9YXX1 117 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 A0A1W2PQD3 144 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 C11orf98E9PRG8 122 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 TFECO14948 347 aaPredicted RBP12.71□□□□□ -0.37
NXF1-201ENST00000294172 CDC40O60508 579 aaKnown RBP eCLIP12.71□□□□□ -0.37
NXF1-201ENST00000294172 CFIP05156 583 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 ELK1P19419 428 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 NKX2-5P52952 324 aaPredicted RBP12.71□□□□□ -0.37
NXF1-201ENST00000294172 CBFBQ13951 182 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 LINC01590Q5TEZ4 76 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 SFXN4Q6P4A7 337 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 PRR23CQ6ZRP0 262 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 PXKQ7Z7A4 578 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 EID2Q8N6I1 236 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 MAFAQ8NHW3 353 aaPredicted RBP12.71□□□□□ -0.37
NXF1-201ENST00000294172 KIAA1143Q96AT1 154 aaPredicted RBP12.71□□□□□ -0.37
NXF1-201ENST00000294172 TSPAN32Q96QS1 320 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 PDCD1LG2Q9BQ51 273 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 TGIF2Q9GZN2 237 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 PPP1R3EQ9H7J1 279 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 RXFP3Q9NSD7 469 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 ADAM30Q9UKF2 790 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 SLC6A5Q9Y345 797 aa12.71□□□□□ -0.37
NXF1-201ENST00000294172 C2orf72A6NCS6 295 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 OGG1O15527 345 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 PNLIPP16233 465 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 OR2B6P58173 313 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 IL10RAQ13651 578 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 QPRTQ15274 297 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 MESTQ5EB52 335 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 TRIQKQ629K1 86 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 PMS2CLQ68D20 193 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 KANSL1Q7Z3B3 1105 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 ANKRD37Q7Z713 158 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 SYT9Q86SS6 491 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 OR2I1PQ8NGU4 316 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 ACOT12Q8WYK0 555 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 SLC22A4Q9H015 551 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 C11orf54Q9H0W9 315 aaPredicted RBP12.71□□□□□ -0.38
NXF1-201ENST00000294172 MMP28Q9H239 520 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 FKRPQ9H9S5 495 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 C12orf10Q9HB07 376 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 TMEM165Q9HC07 324 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 EXTL2Q9UBQ6 330 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 PILRBQ9UKJ0 227 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 RARRES3Q9UL19 164 aa12.71□□□□□ -0.38
NXF1-201ENST00000294172 WDFY4Q6ZS81 3184 aa12.7□□□□□ -0.38
NXF1-201ENST00000294172 PCNX3Q9H6A9 2034 aa12.7□□□□□ -0.38
NXF1-201ENST00000294172 TRAV36DV7A0A075B6V5 113 aa12.7□□□□□ -0.38
NXF1-201ENST00000294172 TVP23AA6NH52 213 aa12.7□□□□□ -0.38
NXF1-201ENST00000294172 DCTN6O00399 190 aa12.7□□□□□ -0.38
NXF1-201ENST00000294172 FADS1O60427 444 aa12.7□□□□□ -0.38
NXF1-201ENST00000294172 SLC19A2O60779 497 aa12.7□□□□□ -0.38
NXF1-201ENST00000294172 SC5DO75845 299 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms