RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CREB3L2Q70SY1 520 aa23.84■■□□□ 1.41
SSU72-201ENST00000291386 SLC46A3Q7Z3Q1 461 aa23.84■■□□□ 1.41
SSU72-201ENST00000291386 GPAT4Q86UL3 456 aa23.84■■□□□ 1.41
SSU72-201ENST00000291386 EPHX4Q8IUS5 362 aa23.84■■□□□ 1.41
SSU72-201ENST00000291386 C10orf53Q8N6V4 93 aa23.84■■□□□ 1.41
SSU72-201ENST00000291386 PFN4Q8NHR9 129 aa23.84■■□□□ 1.41
SSU72-201ENST00000291386 CCDC124Q96CT7 223 aaKnown RBP23.84■■□□□ 1.41
SSU72-201ENST00000291386 PIP5K1AQ99755 562 aa23.84■■□□□ 1.41
SSU72-201ENST00000291386 MAGIXQ9H6Y5 334 aa23.84■■□□□ 1.41
SSU72-201ENST00000291386 NANSQ9NR45 359 aa23.84■■□□□ 1.41
SSU72-201ENST00000291386 ENO4A6NNW6 628 aa23.83■■□□□ 1.41
SSU72-201ENST00000291386 MS4A18H0YCH9 400 aa23.83■■□□□ 1.41
SSU72-201ENST00000291386 hCG_2039718K7EN88 272 aa23.83■■□□□ 1.41
SSU72-201ENST00000291386 MRPL33O75394 65 aaKnown RBP23.83■■□□□ 1.41
SSU72-201ENST00000291386 ASAH2BP0C7U1 165 aa23.83■■□□□ 1.41
SSU72-201ENST00000291386 COX6B1P14854 86 aa23.83■■□□□ 1.41
SSU72-201ENST00000291386 POU2F1P14859 743 aa23.83■■□□□ 1.41
SSU72-201ENST00000291386 FAM27E3Q08E93 113 aa23.83■■□□□ 1.41
SSU72-201ENST00000291386 MS4A18Q3C1V0 323 aa23.83■■□□□ 1.41
SSU72-201ENST00000291386 HIST2H2BCQ6DN03 193 aa23.83■■□□□ 1.41
SSU72-201ENST00000291386 GABRG1Q8N1C3 465 aa23.83■■□□□ 1.41
SSU72-201ENST00000291386 ACOT11Q8WXI4 607 aaPredicted RBP23.83■■□□□ 1.41
SSU72-201ENST00000291386 MMADHCQ9H3L0 296 aaPredicted RBP23.83■■□□□ 1.41
SSU72-201ENST00000291386 C20orf141Q9NUB4 165 aa23.83■■□□□ 1.41
SSU72-201ENST00000291386 FLNBO75369 2602 aaKnown RBP23.82■■□□□ 1.4
SSU72-201ENST00000291386 PLPP3O14495 311 aa23.82■■□□□ 1.4
SSU72-201ENST00000291386 HNRNPRO43390 633 aaKnown RBP23.82■■□□□ 1.4
SSU72-201ENST00000291386 H1F0P07305 194 aaKnown RBP23.82■■□□□ 1.4
SSU72-201ENST00000291386 EDNRAP25101 427 aa23.82■■□□□ 1.4
SSU72-201ENST00000291386 MAGEA2P43356 314 aa23.82■■□□□ 1.4
SSU72-201ENST00000291386 ZP4Q12836 540 aa23.82■■□□□ 1.4
SSU72-201ENST00000291386 PMS2P3Q13401 168 aa23.82■■□□□ 1.4
SSU72-201ENST00000291386 ZNF100Q8IYN0 542 aa23.82■■□□□ 1.4
SSU72-201ENST00000291386 KDM8Q8N371 416 aa23.82■■□□□ 1.4
SSU72-201ENST00000291386 APH1AQ96BI3 265 aa23.82■■□□□ 1.4
SSU72-201ENST00000291386 SGTBQ96EQ0 304 aa23.82■■□□□ 1.4
SSU72-201ENST00000291386 LRGUKQ96M69 825 aa23.82■■□□□ 1.4
SSU72-201ENST00000291386 ZNF385AQ96PM9 386 aaKnown RBP23.82■■□□□ 1.4
SSU72-201ENST00000291386 ZNF347Q96SE7 839 aa23.82■■□□□ 1.4
SSU72-201ENST00000291386 TRIM15Q9C019 465 aa23.82■■□□□ 1.4
SSU72-201ENST00000291386 LRMDAQ9H2I8 198 aa23.82■■□□□ 1.4
SSU72-201ENST00000291386 A0A087WUU8 490 aa23.81■■□□□ 1.4
SSU72-201ENST00000291386 AQP12BA6NM10 295 aa23.81■■□□□ 1.4
SSU72-201ENST00000291386 OR7A10O76100 309 aa23.81■■□□□ 1.4
SSU72-201ENST00000291386 NQO1P15559 274 aaKnown RBP23.81■■□□□ 1.4
SSU72-201ENST00000291386 ZNF43P17038 809 aa23.81■■□□□ 1.4
SSU72-201ENST00000291386 PUDPQ08623 228 aa23.81■■□□□ 1.4
SSU72-201ENST00000291386 Q6ZT83 130 aa23.81■■□□□ 1.4
SSU72-201ENST00000291386 ZDHHC21Q8IVQ6 265 aa23.81■■□□□ 1.4
SSU72-201ENST00000291386 AQP12AQ8IXF9 295 aa23.81■■□□□ 1.4
SSU72-201ENST00000291386 OR10A4Q9H209 315 aa23.81■■□□□ 1.4
SSU72-201ENST00000291386 PRSS50Q9UI38 385 aa23.81■■□□□ 1.4
SSU72-201ENST00000291386 PKDREJQ9NTG1 2253 aa23.81■■□□□ 1.4
SSU72-201ENST00000291386 ADGRG4Q8IZF6 3080 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 C16orf97H3BN30 126 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 HPRP00739 348 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 FUT1P19526 365 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 UGT2B10P36537 528 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 SMIM11AP58511 58 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 PRKCDQ05655 676 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 P2RY6Q15077 328 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 EXOC3L2Q2M3D2 409 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 FBXW9Q5XUX1 488 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 NHLRC1Q6VVB1 395 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 MBOAT2Q6ZWT7 520 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 PXKQ7Z7A4 578 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 LRRC17Q8N6Y2 441 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 SLC7A13Q8TCU3 470 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 SEPHS2Q99611 448 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 TAS2R5Q9NYW4 299 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 KCNN3Q9UGI6 736 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 SLC7A8Q9UHI5 535 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 POMPQ9Y244 141 aa23.8■■□□□ 1.4
SSU72-201ENST00000291386 TRAF3IP2O43734 574 aaPredicted RBP23.79■■□□□ 1.4
SSU72-201ENST00000291386 PIP5K1CO60331 668 aa23.79■■□□□ 1.4
SSU72-201ENST00000291386 DIRAS1O95057 198 aa23.79■■□□□ 1.4
SSU72-201ENST00000291386 HIST1H2ABP04908 130 aa23.79■■□□□ 1.4
SSU72-201ENST00000291386 TSPAN19P0C672 248 aa23.79■■□□□ 1.4
SSU72-201ENST00000291386 PSMB1P20618 241 aaKnown RBP23.79■■□□□ 1.4
SSU72-201ENST00000291386 LSM11P83369 360 aaKnown RBP eCLIP23.79■■□□□ 1.4
SSU72-201ENST00000291386 FOXD4Q12950 439 aaPredicted RBP23.79■■□□□ 1.4
SSU72-201ENST00000291386 ZNF787Q6DD87 383 aa23.79■■□□□ 1.4
SSU72-201ENST00000291386 CASP12Q6UXS9 341 aa23.79■■□□□ 1.4
SSU72-201ENST00000291386 STAC2Q6ZMT1 411 aa23.79■■□□□ 1.4
SSU72-201ENST00000291386 HIST3H2AQ7L7L0 130 aa23.79■■□□□ 1.4
SSU72-201ENST00000291386 AAED1Q7RTV5 226 aa23.79■■□□□ 1.4
SSU72-201ENST00000291386 NRMQ8IXM6 262 aa23.79■■□□□ 1.4
SSU72-201ENST00000291386 HIST1H2ACQ93077 130 aa23.79■■□□□ 1.4
SSU72-201ENST00000291386 BPIFA2Q96DR5 249 aa23.79■■□□□ 1.4
SSU72-201ENST00000291386 FUZQ9BT04 418 aa23.79■■□□□ 1.4
SSU72-201ENST00000291386 MALT1Q9UDY8 824 aa23.79■■□□□ 1.4
SSU72-201ENST00000291386 RCE1Q9Y256 329 aa23.79■■□□□ 1.4
SSU72-201ENST00000291386 GPR52Q9Y2T5 361 aa23.79■■□□□ 1.4
SSU72-201ENST00000291386 NOX1Q9Y5S8 564 aa23.79■■□□□ 1.4
SSU72-201ENST00000291386 ANKHD1Q8IWZ3 2542 aaKnown RBP23.78■■□□□ 1.4
SSU72-201ENST00000291386 TUBAL3A6NHL2 446 aa23.78■■□□□ 1.4
SSU72-201ENST00000291386 EBAG9O00559 213 aa23.78■■□□□ 1.4
SSU72-201ENST00000291386 UMPSP11172 480 aa23.78■■□□□ 1.4
SSU72-201ENST00000291386 IFI30P13284 250 aa23.78■■□□□ 1.4
SSU72-201ENST00000291386 CCKARP32238 428 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms