RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 B3GALNT1O75752 331 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 F12P00748 615 aaPredicted RBP13.1□□□□□ -0.31
VPS26B-201ENST00000281187 ZNF28P17035 718 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 RBM34P42696 430 aaKnown RBP13.1□□□□□ -0.31
VPS26B-201ENST00000281187 LSSP48449 732 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 SREBF2Q12772 1141 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 RIN1Q13671 783 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 RAB33AQ14088 237 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 Q6ZNB5 142 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 OR5K2Q8NHB8 316 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 RBM18Q96H35 190 aaKnown RBP13.1□□□□□ -0.31
VPS26B-201ENST00000281187 UBL7Q96S82 380 aaPredicted RBP13.1□□□□□ -0.31
VPS26B-201ENST00000281187 SRMSQ9H3Y6 488 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 NIT2Q9NQR4 276 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 MRPS18AQ9NVS2 196 aaKnown RBP13.1□□□□□ -0.31
VPS26B-201ENST00000281187 GPN3Q9UHW5 284 aaPredicted RBP13.1□□□□□ -0.31
VPS26B-201ENST00000281187 A0A1B0GTH9 108 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 F13BP05160 661 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 TMIGD3P0DMS9 266 aaPredicted RBP13.1□□□□□ -0.31
VPS26B-201ENST00000281187 TDGQ13569 410 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 EIF2B1Q14232 305 aaKnown RBP13.1□□□□□ -0.31
VPS26B-201ENST00000281187 NHLRC3Q5JS37 347 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 TMEM205Q6UW68 189 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 FAM180AQ6UWF9 173 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 TMEM150AQ86TG1 271 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 APOBEC4Q8WW27 367 aaKnown RBP13.1□□□□□ -0.31
VPS26B-201ENST00000281187 KLHL15Q96M94 604 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 ZNF285Q96NJ3 590 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 USB1Q9BQ65 265 aaKnown RBP13.1□□□□□ -0.31
VPS26B-201ENST00000281187 POFUT1Q9H488 388 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 ZNF346Q9UL40 294 aaKnown RBP13.1□□□□□ -0.31
VPS26B-201ENST00000281187 SLC6A5Q9Y345 797 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 CENPVL1A0A0U1RR11 272 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 XKRYO14609 159 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 VEGFDO43915 354 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 RAB40ALP0C0E4 278 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 OR2T7P0C7T2 308 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 F3P13726 295 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 ENPP2Q13822 863 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 DCAF12L2Q5VW00 463 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 GLT8D1Q68CQ7 371 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 MFSD12Q6NUT3 480 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 SLC48A1Q6P1K1 146 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 OR2T27Q8NH04 317 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 OR14C36Q8NHC7 312 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 RAB40AQ8WXH6 277 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 DCUN1D4Q92564 292 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 FAM46BQ96A09 425 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 TAS2R8Q9NYW2 309 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 SLC27A6Q9Y2P4 619 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 LTBP4Q8N2S1 1624 aa13.1□□□□□ -0.31
VPS26B-201ENST00000281187 TBC1D3DA0A087WVF3 549 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 TBC1D3IA0A087WXS9 549 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 TBC1D3KA0A087X1G2 549 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 TBC1D3FA6NER0 549 aaPredicted RBP13.09□□□□□ -0.31
VPS26B-201ENST00000281187 TBC1D3LB9A6J9 549 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 PLGP00747 810 aaPredicted RBP13.09□□□□□ -0.31
VPS26B-201ENST00000281187 CSF1P09603 554 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 TBC1D3HP0C7X1 549 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 AKR1C3P42330 323 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 RAB5BP61020 215 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 CXADRP78310 365 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 REEP5Q00765 189 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 BAMBIQ13145 260 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 PDGFRLQ15198 375 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 TBC1D3GQ6DHY5 549 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 TBC1D3CQ6IPX1 549 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 RGS7BPQ6MZT1 257 aaPredicted RBP13.09□□□□□ -0.31
VPS26B-201ENST00000281187 ABHD17CQ6PCB6 329 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 LRRTM1Q86UE6 522 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 TCEAL8Q8IYN2 117 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 TBC1D3Q8IZP1 549 aaPredicted RBP13.09□□□□□ -0.31
VPS26B-201ENST00000281187 INSM2Q96T92 566 aaPredicted RBP13.09□□□□□ -0.31
VPS26B-201ENST00000281187 KCNK15Q9H427 330 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 FBXO34Q9NWN3 711 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 ING1Q9UK53 422 aaPredicted RBP13.09□□□□□ -0.31
VPS26B-201ENST00000281187 A0A1B0GWA3 101 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 URADA6NGE7 173 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 CDC40O60508 579 aaKnown RBP eCLIP13.09□□□□□ -0.31
VPS26B-201ENST00000281187 ABLIM3O94929 683 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 RPS27AP62979 156 aaKnown RBP13.09□□□□□ -0.31
VPS26B-201ENST00000281187 UBA52P62987 128 aaKnown RBP13.09□□□□□ -0.31
VPS26B-201ENST00000281187 ZNF85Q03923 595 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 PDZK1IP1Q13113 114 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 STEAP1BQ6NZ63 245 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 ZNF584Q8IVC4 421 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 ZNF547Q8IVP9 402 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 ZNF619Q8N2I2 560 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 PLPP7Q8NBV4 271 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 ZBTB8AQ96BR9 441 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 CMSS1Q9BQ75 279 aaKnown RBP13.09□□□□□ -0.31
VPS26B-201ENST00000281187 RSPO3Q9BXY4 272 aaPredicted RBP13.09□□□□□ -0.31
VPS26B-201ENST00000281187 METTL8Q9H825 291 aaKnown RBP13.09□□□□□ -0.31
VPS26B-201ENST00000281187 ADGRL4Q9HBW9 690 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 SAGE1Q9NXZ1 904 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 OPN4Q9UHM6 478 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 PLEKHM1Q9Y4G2 1056 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 TRIM77I1YAP6 450 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 PAPLNO95428 1278 aa13.09□□□□□ -0.31
VPS26B-201ENST00000281187 APOC1P02654 83 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms