RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 MNAT1P51948 309 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 CLDN20P56880 219 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 PROK1P58294 105 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 AP3S2P59780 193 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 MAGOHP61326 146 aaKnown RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 S100A12P80511 92 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 PITPNAQ00169 270 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 REEP5Q00765 189 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 EWSR1Q01844 656 aaKnown RBP eCLIP4.03□□□□□ -1.76
CD44-202ENST00000278385 GUCY2DQ02846 1103 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 SRYQ05066 204 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 TSPAN31Q12999 210 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 CAPRIN1Q14444 709 aaKnown RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 MEF2DQ14814 521 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 SLC17A1Q14916 467 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 TRAM2Q15035 370 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 C5orf64Q2M2E5 130 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 VPS26BQ4G0F5 336 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 ACTBL2Q562R1 376 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 KHDRBS2Q5VWX1 349 aaKnown RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 OR4A47Q6IF82 309 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 LINGO4Q6UY18 593 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 ZNF782Q6ZMW2 699 aaPredicted RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 UTS2BQ765I0 119 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 P4HA3Q7Z4N8 544 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 YTHDF3Q7Z739 585 aaKnown RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 MARCH9Q86YJ5 346 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 SLC13A5Q86YT5 568 aaPredicted RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 CDK20Q8IZL9 346 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 ELMOD1Q8N336 334 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 CCNYL1Q8N7R7 359 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 TTC29Q8NA56 475 aaPredicted RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 INO80EQ8NBZ0 244 aaPredicted RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 CCDC197Q8NCU1 140 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 OR4A4PQ8NGN8 299 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 OR2L8Q8NGY9 312 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 OSR1Q8TAX0 266 aaPredicted RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 RNF128Q8TEB7 428 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 LRRC15Q8TF66 581 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 ACOT11Q8WXI4 607 aaPredicted RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 PIGTQ969N2 578 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 C18orf25Q96B23 403 aaPredicted RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 DNAJC19Q96DA6 116 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 RITA1Q96K30 269 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 UHRF2Q96PU4 802 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 FMO2Q99518 471 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 PANK2Q9BZ23 570 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 RACGAP1Q9H0H5 632 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 OR51B6Q9H340 312 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 ATP13A3Q9H7F0 1226 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 SP140LQ9H930 580 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 ACKR4Q9NPB9 350 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 INPP5EQ9NRR6 644 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 STARD5Q9NSY2 213 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 ASIC5Q9NY37 505 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 TAS2R7Q9NYW3 318 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 WARS2Q9UGM6 360 aaKnown RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 KIF25Q9UIL4 384 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 FBXL2Q9UKC9 423 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 NPIPA1Q9UND3 350 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 FAF1Q9UNN5 650 aaPredicted RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 OR1A2Q9Y585 309 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 TSSC4Q9Y5U2 329 aaPredicted RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 PEX16Q9Y5Y5 336 aa4.03□□□□□ -1.76
CD44-202ENST00000278385 SPIN1Q9Y657 262 aaPredicted RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 MYH9P35579 1960 aaKnown RBP4.03□□□□□ -1.76
CD44-202ENST00000278385 FNDC1Q4ZHG4 1894 aaPredicted RBP4.03□□□□□ -1.77
CD44-202ENST00000278385 EVPLQ92817 2033 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 LRP5LA4QPB2 252 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 SERINC4A6NH21 518 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 ANKRD63C9JTQ0 380 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 ANHXE9PGG2 379 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 H3BN98 237 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 I3L4J1 428 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 PIRO00625 290 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 CCL16O15467 120 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 CHST1O43916 411 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 FAM189A1O60320 539 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 GPR137BO60478 399 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 SRPX2O60687 465 aaPredicted RBP4.02□□□□□ -1.77
CD44-202ENST00000278385 HUS1O60921 280 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 PRKRAO75569 313 aaKnown RBP4.02□□□□□ -1.77
CD44-202ENST00000278385 FCN3O75636 299 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 ZMPSTE24O75844 475 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 TMEM50AO95807 157 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 ASS1P00966 412 aaKnown RBP4.02□□□□□ -1.77
CD44-202ENST00000278385 NR3C1P04150 777 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 SLC35G4P0C7Q5 338 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 PMCHP20382 165 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 PRPS1L1P21108 318 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 BGNP21810 368 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 LMO1P25800 156 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 RBMS1P29558 406 aaKnown RBP4.02□□□□□ -1.77
CD44-202ENST00000278385 PRDX3P30048 256 aaKnown RBP4.02□□□□□ -1.77
CD44-202ENST00000278385 BDKRB2P30411 391 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 CCKBRP32239 447 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 GTF2H1P32780 548 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 SFTPDP35247 375 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 UGT2B10P36537 528 aa4.02□□□□□ -1.77
CD44-202ENST00000278385 HPCAL1P37235 193 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms