RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 AVPR2P30518 371 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 CCKBRP32239 447 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 PYCR1P32322 319 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 NAA10P41227 235 aaPredicted RBP8.68□□□□□ -1.02
TRIM55-201ENST00000276573 DLX5P56178 289 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 TAS2R43P59537 309 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 E2F1Q01094 437 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 ATP1A4Q13733 1029 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 C11orf91Q3C1V1 193 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 FAM69AQ5T7M9 428 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 C1orf140Q5VVS0 124 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 C5orf46Q6UWT4 87 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 ZNF517Q6ZMY9 492 aaPredicted RBP8.68□□□□□ -1.02
TRIM55-201ENST00000276573 LSM14AQ8ND56 463 aaKnown RBP8.68□□□□□ -1.02
TRIM55-201ENST00000276573 OR5J2Q8NH18 312 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 SLC22A8Q8TCC7 542 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 DNAJA3Q96EY1 480 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 CEP19Q96LK0 163 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 TSPAN32Q96QS1 320 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 ALG12Q9BV10 488 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 ULBP3Q9BZM4 244 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 ZNF700Q9H0M5 742 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 GALNT9Q9HCQ5 603 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 SRA1Q9HD15 236 aaKnown RBP8.68□□□□□ -1.02
TRIM55-201ENST00000276573 RPRD1BQ9NQG5 326 aaKnown RBP8.68□□□□□ -1.02
TRIM55-201ENST00000276573 MED11Q9P086 117 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 MOKQ9UQ07 419 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 POLHQ9Y253 713 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 PTRH2Q9Y3E5 179 aaKnown RBP8.68□□□□□ -1.02
TRIM55-201ENST00000276573 PCDHGA5Q9Y5G8 931 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 PCNX3Q9H6A9 2034 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 TEX51A0A1B0GUA7 166 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 C9J4A7 227 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 LOC110117498-PIK3R3F6TDL0 507 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 OR2T1O43869 369 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 SELENOFO60613 162 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 SERPINI2O75830 405 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 UPK1BO75841 260 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 RGS9O75916 674 aaPredicted RBP8.68□□□□□ -1.02
TRIM55-201ENST00000276573 DXOO77932 396 aaKnown RBP8.68□□□□□ -1.02
TRIM55-201ENST00000276573 DKK1O94907 266 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 OCM2P0CE71 109 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 OCMP0CE72 109 aaPredicted RBP8.68□□□□□ -1.02
TRIM55-201ENST00000276573 PRKCAP17252 672 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 MSX1P28360 303 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 PTGDSP41222 190 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 APOBEC1P41238 236 aaKnown RBP8.68□□□□□ -1.02
TRIM55-201ENST00000276573 TMED10P49755 219 aaKnown RBP8.68□□□□□ -1.02
TRIM55-201ENST00000276573 INSL4Q14641 139 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 TRAM1Q15629 374 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 SGCBQ16585 318 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 BTBD16Q32M84 506 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 CDONQ4KMG0 1287 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 MESTQ5EB52 335 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 SPANXN2Q5MJ10 180 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 PLA2G2CQ5R387 149 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 BICRALQ6AI39 1079 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 DMKNQ6E0U4 476 aaPredicted RBP8.68□□□□□ -1.02
TRIM55-201ENST00000276573 SYS1Q8N2H4 156 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 RFLNBQ8N5W9 214 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 GALNT6Q8NCL4 622 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 OR6K6Q8NGW6 343 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 OR6S1Q8NH40 331 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 ABHD4Q8TB40 342 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 IMMP1LQ96LU5 166 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 WDFY2Q96P53 400 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 TSSK2Q96PF2 358 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 NPAS1Q99742 590 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 SLC30A2Q9BRI3 323 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 OR11A1Q9GZK7 315 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 SDHAF3Q9NRP4 125 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 NCDNQ9UBB6 729 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 DAPK2Q9UIK4 370 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 UGT2A1Q9Y4X1 527 aa8.68□□□□□ -1.02
TRIM55-201ENST00000276573 IGLV3-32A0A0A0MS00 114 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 IGHV1-45A0A0A0MS14 117 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 A0A0C4DFX4 3053 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 SLC35F4A4IF30 521 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 FAM171A2A8MVW0 826 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 CASKO14936 926 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 MAGEB4O15481 346 aaPredicted RBP8.67□□□□□ -1.02
TRIM55-201ENST00000276573 RGS5O15539 181 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 AHSA1O95433 338 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 RENP00797 406 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 F8A1P23610 371 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 GRPRP30550 384 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 CAV3P56539 151 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 HSF2Q03933 536 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 SLC3A1Q07837 685 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 KRR1Q13601 381 aaKnown RBP8.67□□□□□ -1.02
TRIM55-201ENST00000276573 OXA1LQ15070 435 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 NTRK2Q16620 822 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 ZNF181Q2M3W8 571 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 TRIM16LQ309B1 348 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 TP53I3Q53FA7 332 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 ARL9Q6T311 187 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 LYPD4Q6UWN0 246 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 ARSKQ6UWY0 536 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 ZNF511Q8NB15 262 aa8.67□□□□□ -1.02
TRIM55-201ENST00000276573 OR2Y1Q8NGV0 311 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms