RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 ZNF317Q96PQ6 595 aaPredicted RBP12.66□□□□□ -0.38
HMGN3-201ENST00000275036 KLHL14Q9P2G3 628 aa12.66□□□□□ -0.38
HMGN3-201ENST00000275036 RASD1Q9Y272 281 aa12.66□□□□□ -0.38
HMGN3-201ENST00000275036 MAGED1Q9Y5V3 778 aaPredicted RBP12.66□□□□□ -0.38
HMGN3-201ENST00000275036 ARFGEF3Q5TH69 2177 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 TRAV36DV7A0A075B6V5 113 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 LOC100653049A0A140TA62 436 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 M0R082 166 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 OVOL3O00110 214 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 MRASO14807 208 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 KRT34O76011 436 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 LYPD3O95274 346 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 THY1P04216 161 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 C8BP07358 591 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 MPGP29372 298 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 GRPRP30550 384 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 MDH1P40925 334 aaKnown RBP12.65□□□□□ -0.38
HMGN3-201ENST00000275036 ZNF83P51522 516 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 CYLC2Q14093 348 aaPredicted RBP12.65□□□□□ -0.38
HMGN3-201ENST00000275036 VMACQ2NL98 169 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 HSP90B2PQ58FF3 399 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 COQ5Q5HYK3 327 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 OR7E24Q6IFN5 339 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 WDR88Q6ZMY6 472 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 ZNF417Q8TAU3 575 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 FBXW5Q969U6 566 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 ZNF587Q96SQ5 575 aaPredicted RBP12.65□□□□□ -0.38
HMGN3-201ENST00000275036 MCHR1Q99705 422 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 C1QTNF6Q9BXI9 259 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 TMEM27Q9HBJ8 222 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 MED4Q9NPJ6 270 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 SLC17A5Q9NRA2 495 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 ARMCX1Q9P291 453 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 SLC13A4Q9UKG4 626 aa12.65□□□□□ -0.38
HMGN3-201ENST00000275036 DNHD1Q96M86 4753 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 BBIP1A8MTZ0 92 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 LRRN3E7EW58 273 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 ABCD4O14678 606 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 AIM2O14862 343 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 SMAD7O15105 426 aaKnown RBP12.64□□□□□ -0.39
HMGN3-201ENST00000275036 OR2T1O43869 369 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 FMO6PO60774 539 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 UPK3AO75631 287 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 ZNF432O94892 652 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 LY6G6DO95868 133 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 HPRP00739 348 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 BGLAPP02818 100 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 CDKN1AP38936 164 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 KRTAP21-3Q3LHN1 58 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 MMEL1Q495T6 779 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 ENTPD8Q5MY95 495 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 NIPAL3Q6P499 406 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 C5orf46Q6UWT4 87 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 CLEC9AQ6UXN8 241 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 LINC00114Q6XXX2 140 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 CCDC80Q76M96 950 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 PATL1Q86TB9 770 aaKnown RBP12.64□□□□□ -0.39
HMGN3-201ENST00000275036 RANBP3LQ86VV4 465 aaPredicted RBP12.64□□□□□ -0.39
HMGN3-201ENST00000275036 SLC30A8Q8IWU4 369 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 POMGNT2Q8NAT1 580 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 C1orf162Q8NEQ5 155 aaPredicted RBP12.64□□□□□ -0.39
HMGN3-201ENST00000275036 OR8J3Q8NGG0 315 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 VANGL1Q8TAA9 524 aaPredicted RBP12.64□□□□□ -0.39
HMGN3-201ENST00000275036 RNF217Q8TC41 542 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 SLC41A3Q96GZ6 507 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 ZNF583Q96ND8 569 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 MOGAT1Q96PD6 335 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 ALKBH3Q96Q83 286 aaPredicted RBP12.64□□□□□ -0.39
HMGN3-201ENST00000275036 EVA1AQ9H8M9 152 aa12.64□□□□□ -0.39
HMGN3-201ENST00000275036 CPSF4LA6NMK7 179 aaKnown RBP12.63□□□□□ -0.39
HMGN3-201ENST00000275036 MS4A18H0YCH9 400 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 TRAF3IP2O43734 574 aaPredicted RBP12.63□□□□□ -0.39
HMGN3-201ENST00000275036 CD8AP01732 235 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 HEXAP06865 529 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 HLA-DOBP13765 273 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 ZNF43P17038 809 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 CDH2P19022 906 aaPredicted RBP12.63□□□□□ -0.39
HMGN3-201ENST00000275036 CD40P25942 277 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 GTF2E2P29084 291 aaKnown RBP12.63□□□□□ -0.39
HMGN3-201ENST00000275036 CLDN17P56750 224 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 RPS4XP62701 263 aaKnown RBP12.63□□□□□ -0.39
HMGN3-201ENST00000275036 MAPRE2Q15555 327 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 MS4A18Q3C1V0 323 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 HIKESHIQ53FT3 197 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 SWT1Q5T5J6 900 aaKnown RBP12.63□□□□□ -0.39
HMGN3-201ENST00000275036 INTS11Q5TA45 600 aaKnown RBP12.63□□□□□ -0.39
HMGN3-201ENST00000275036 ZNF613Q6PF04 617 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 H1FNTQ75WM6 255 aaPredicted RBP12.63□□□□□ -0.39
HMGN3-201ENST00000275036 SSX8Q7RTT4 187 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 WDFY1Q8IWB7 410 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 C17orf78Q8N4C9 275 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 POU5F2Q8N7G0 328 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 OR6S1Q8NH40 331 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 SMAP2Q8WU79 429 aaPredicted RBP12.63□□□□□ -0.39
HMGN3-201ENST00000275036 OXGR1Q96P68 337 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 ECSITQ9BQ95 431 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 TMEM43Q9BTV4 400 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 CXorf56Q9H5V9 222 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 MRGBPQ9NV56 204 aa12.63□□□□□ -0.39
HMGN3-201ENST00000275036 SELENONQ9NZV5 590 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms