RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 GPR55Q9Y2T6 319 aaPredicted RBP8.48□□□□□ -1.05
PDGFC-201ENST00000274071 YJEFN3A6XGL0 299 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 IQCF5A8MTL0 148 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 ZNF587BE7ETH6 402 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 MAGEB4O15481 346 aaPredicted RBP8.48□□□□□ -1.05
PDGFC-201ENST00000274071 HIST1H2BKO60814 126 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 HIST1H2BJP06899 126 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 EPHX1P07099 455 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 FCGR3AP08637 254 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 QDPRP09417 244 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 FGF7P21781 194 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 HIST1H2BOP23527 126 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 CD1CP29017 333 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 HIST1H2BBP33778 126 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 PCBP4P57723 403 aaKnown RBP8.48□□□□□ -1.05
PDGFC-201ENST00000274071 HIST1H2BDP58876 126 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 HIST1H2BCP62807 126 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 LSM11P83369 360 aaKnown RBP eCLIP8.48□□□□□ -1.05
PDGFC-201ENST00000274071 HIST2H2BEQ16778 126 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 FBXO47Q5MNV8 452 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.48□□□□□ -1.05
PDGFC-201ENST00000274071 FBXW9Q5XUX1 488 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 CDC73Q6P1J9 531 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 TAF8Q7Z7C8 310 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 TRAPPC5Q8IUR0 188 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 GLB1L2Q8IW92 636 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 BAP18Q8IXM2 172 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 MMP21Q8N119 569 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 CBARPQ8N350 705 aaPredicted RBP8.48□□□□□ -1.05
PDGFC-201ENST00000274071 SLC30A7Q8NEW0 376 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 ABHD4Q8TB40 342 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 ZCCHC10Q8TBK6 192 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 SLC7A13Q8TCU3 470 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 OR8D1Q8WZ84 308 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 HIST1H2BHQ93079 126 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 MRGPRX3Q96LB0 322 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 PACRGQ96M98 296 aaPredicted RBP8.48□□□□□ -1.05
PDGFC-201ENST00000274071 WDR92Q96MX6 357 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 S100A13Q99584 98 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 HIST1H2BNQ99877 126 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 HIST1H2BMQ99879 126 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 PLA2G12AQ9BZM1 189 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 GAL3ST2Q9H3Q3 398 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 PARD6AQ9NPB6 346 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 UBQLN4Q9NRR5 601 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 OSER1Q9NX31 292 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 LPAR3Q9UBY5 353 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 CORO2BQ9UQ03 480 aa8.48□□□□□ -1.05
PDGFC-201ENST00000274071 A0A087WUJ7 227 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 A0A1W2PPK0 400 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 SLC5A10A0PJK1 596 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 C9J4A7 227 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 FAAHO00519 579 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 VNN2O95498 520 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 CD14P08571 375 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 GZMBP10144 247 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 PKMP14618 531 aaKnown RBP8.47□□□□□ -1.05
PDGFC-201ENST00000274071 HOXA11P31270 313 aaPredicted RBP8.47□□□□□ -1.05
PDGFC-201ENST00000274071 RBM34P42696 430 aaKnown RBP8.47□□□□□ -1.05
PDGFC-201ENST00000274071 CDH11P55287 796 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 ST8SIA6P61647 398 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 AIMP2Q13155 320 aaKnown RBP8.47□□□□□ -1.05
PDGFC-201ENST00000274071 MAP2K5Q13163 448 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 MAPK14Q16539 360 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 PRRT3Q5FWE3 981 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 CTSL3PQ5NE16 218 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 MORN1Q5T089 497 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 TCTN3Q6NUS6 607 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 PSRC1Q6PGN9 363 aaPredicted RBP8.47□□□□□ -1.05
PDGFC-201ENST00000274071 FAM83HQ6ZRV2 1179 aaPredicted RBP8.47□□□□□ -1.05
PDGFC-201ENST00000274071 PXKQ7Z7A4 578 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 SYT12Q8IV01 421 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 PAQR4Q8N4S7 273 aaPredicted RBP8.47□□□□□ -1.05
PDGFC-201ENST00000274071 HSD17B11Q8NBQ5 300 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 OR7G2Q8NG99 324 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 OR1N1Q8NGS0 311 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 CCDC107Q8WV48 283 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 C5orf34Q96MH7 638 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 GPA33Q99795 319 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 KPTNQ9Y664 436 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 TBC1D3BA6NDS4 549 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 TP53I11O14683 189 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 PRICKLE3O43900 615 aaPredicted RBP8.47□□□□□ -1.05
PDGFC-201ENST00000274071 IGHA1P01876 353 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 TBC1D3HP0C7X1 549 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 SMIM10L2AP0DMW4 78 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 SMIM10L2BP0DMW5 78 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 TPT1P13693 172 aaKnown RBP8.47□□□□□ -1.05
PDGFC-201ENST00000274071 FOSL2P15408 326 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 AMD1P17707 334 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 CDKN1BP46527 198 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 ZNF157P51786 506 aaPredicted RBP8.47□□□□□ -1.05
PDGFC-201ENST00000274071 HTRA3P83110 453 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 AKR1C8PQ5T2L2 129 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 TBC1D3GQ6DHY5 549 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 ARL9Q6T311 187 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 DRAM2Q6UX65 266 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 SERPINA13PQ6UXR4 307 aa8.47□□□□□ -1.05
PDGFC-201ENST00000274071 CXXC5Q7LFL8 322 aaKnown RBP8.47□□□□□ -1.05
PDGFC-201ENST00000274071 EID2Q8N6I1 236 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms