RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 MSTNO14793 375 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 OR7A10O76100 309 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 MT-ATP6P00846 226 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 CD8BP10966 210 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 IFI30P13284 250 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 NQO1P15559 274 aaKnown RBP11.32□□□□□ -0.6
SS18-202ENST00000269138 MAKP20794 623 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 RRM2P31350 389 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 ASCL1P50553 236 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 MFSD13AQ14CX5 517 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 HIST2H2BCQ6DN03 193 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 MBOAT2Q6ZWT7 520 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 MAMDC2Q7Z304 686 aaPredicted RBP11.32□□□□□ -0.6
SS18-202ENST00000269138 GALNT5Q7Z7M9 940 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 EPHX4Q8IUS5 362 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 OR5J2Q8NH18 312 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 ZNF347Q96SE7 839 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 SF3B5Q9BWJ5 86 aaKnown RBP11.32□□□□□ -0.6
SS18-202ENST00000269138 CHID1Q9BWS9 393 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 KLHL4Q9C0H6 718 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 ANKRD19PQ9H560 264 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 FKRPQ9H9S5 495 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 NANSQ9NR45 359 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 VNN3Q9NY84 501 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 EMC3Q9P0I2 261 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 RASD1Q9Y272 281 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 B3GALT5Q9Y2C3 310 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 NOSIPQ9Y314 301 aaKnown RBP11.32□□□□□ -0.6
SS18-202ENST00000269138 CORINQ9Y5Q5 1042 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 KLF2Q9Y5W3 355 aaPredicted RBP11.32□□□□□ -0.6
SS18-202ENST00000269138 ICE1Q9Y2F5 2266 aa11.32□□□□□ -0.6
SS18-202ENST00000269138 BAHCC1Q9P281 2608 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 GPR171O14626 319 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 GADD45GO95257 159 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 ASAH2BP0C7U1 165 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 RAP2AP10114 183 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 UMPSP11172 480 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 HLA-DOBP13765 273 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 IL1RL1Q01638 556 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 PRKCDQ05655 676 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 PPP1R8Q12972 351 aaKnown RBP11.31□□□□□ -0.6
SS18-202ENST00000269138 SNTB1Q13884 538 aaKnown RBP11.31□□□□□ -0.6
SS18-202ENST00000269138 CCNIQ14094 377 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 EXOC3L2Q2M3D2 409 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 C1orf146Q5VVC0 180 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 TFAP2EQ6VUC0 442 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 NHLRC1Q6VVB1 395 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 CREB3L2Q70SY1 520 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 SCAIQ8N9R8 606 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 ADPRHL1Q8NDY3 354 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 SLCO4A1Q96BD0 722 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 BPIFA2Q96DR5 249 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 OXGR1Q96P68 337 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 TACO1Q9BSH4 297 aaKnown RBP11.31□□□□□ -0.6
SS18-202ENST00000269138 RBM24Q9BX46 236 aaKnown RBP11.31□□□□□ -0.6
SS18-202ENST00000269138 TAS2R5Q9NYW4 299 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 PLEKHB1Q9UF11 243 aaPredicted RBP11.31□□□□□ -0.6
SS18-202ENST00000269138 PRSS50Q9UI38 385 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 ZNF229Q9UJW7 825 aa11.31□□□□□ -0.6
SS18-202ENST00000269138 SH3PXD2BA1X283 911 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 C11orf98E9PRG8 122 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 BLOC1S5-TXNDC5H3BN57 136 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 VAMP5O95183 116 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 IGF2P01344 180 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 IGHV3-9P01782 118 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 HIST1H2ABP04908 130 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 ADORA3P0DMS8 318 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 UQCRC1P31930 480 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 GPR4P46093 362 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 OR3A2P47893 321 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 SMIM11AP58511 58 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 GABPB1Q06547 395 aaPredicted RBP11.3□□□□□ -0.6
SS18-202ENST00000269138 FAM27E3Q08E93 113 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 FBXL19-AS1Q494R0 122 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 HIST3H2AQ7L7L0 130 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 WDFY1Q8IWB7 410 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 RNF113BQ8IZP6 322 aaKnown RBP11.3□□□□□ -0.6
SS18-202ENST00000269138 OR4K5Q8NGD3 323 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 HIST1H2ACQ93077 130 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 RNASE6Q93091 150 aaKnown RBP11.3□□□□□ -0.6
SS18-202ENST00000269138 POP5Q969H6 163 aaKnown RBP11.3□□□□□ -0.6
SS18-202ENST00000269138 ALPK1Q96QP1 1244 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 GALNT8Q9NY28 637 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 LYVE1Q9Y5Y7 322 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 CACNA1CQ13936 2221 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 LOC102725191A0A1B0GVB3 256 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 CDC42EP2O14613 210 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 TRAF3IP2O43734 574 aaPredicted RBP11.3□□□□□ -0.6
SS18-202ENST00000269138 MRPL33O75394 65 aaKnown RBP11.3□□□□□ -0.6
SS18-202ENST00000269138 SERPINI2O75830 405 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 CIB2O75838 187 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 OR6A2O95222 327 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 ZNF43P17038 809 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 AHCYP23526 432 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 AQP2P41181 271 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 LIMS1P48059 325 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 CLDN17P56750 224 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 LGALS3BPQ08380 585 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 PUDPQ08623 228 aa11.3□□□□□ -0.6
SS18-202ENST00000269138 FHL1Q13642 323 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms