RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 SPACA1Q9HBV2 294 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 CLEC4EQ9ULY5 219 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 GAPDHSO14556 408 aaPredicted RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 GPRIN2O60269 458 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 EGFP01133 1207 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 BIDP55957 195 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 TRA2BP62995 288 aaKnown RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 C3orf38Q5JPI3 329 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 KIAA1211LQ6NV74 962 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 RNF128Q8TEB7 428 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 IRF7Q92985 503 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 NUDT9Q9BW91 350 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 SLC6A14Q9UN76 642 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 EIF1BO60739 113 aaKnown RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 B4GALT2O60909 372 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 NME2P22392 152 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 EIF1P41567 113 aaKnown RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 ZNF84P51523 738 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 SLC16A12Q6ZSM3 486 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 GLYATL2Q8WU03 294 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 KLHL15Q96M94 604 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 FIZ1Q96SL8 496 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 ARV1Q9H2C2 271 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 CXXC1Q9P0U4 656 aaPredicted RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 MARCH4Q9P2E8 410 aaPredicted RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 EMCNQ9ULC0 261 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 KIAA1551Q9HCM1 1747 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 A0A1W2PPK0 400 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 VSTM2BA6NLU5 285 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 GPR89AB7ZAQ6 455 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 AQP7O14520 342 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 CYB5BO43169 146 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 HOXD4P09016 255 aaPredicted RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 GPR89BP0CG08 455 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 CAMK2DQ13557 499 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 RAB31Q13636 194 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 LTB4RQ15722 352 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 CTU2Q2VPK5 515 aaKnown RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 FRMD1Q8N878 549 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 DYRK2Q92630 601 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 METTL7AQ9H8H3 244 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 FN3KRPQ9HA64 309 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 ZNF226Q9NYT6 803 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 RBPJLQ9UBG7 517 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 MMP2P08253 660 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 SGSHP51688 502 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 SELENOVP59797 346 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 LEG1Q6P5S2 330 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 PTRH1Q86Y79 214 aaKnown RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 SLC43A2Q8N370 569 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 TMEM130Q8N3G9 435 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 OR5AK2Q8NH90 309 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 MS4A3Q96HJ5 214 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 GPR137Q96N19 417 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 ACPTQ9BZG2 426 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 NMNAT1Q9HAN9 279 aaPredicted RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 MED17Q9NVC6 651 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 RCE1Q9Y256 329 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 SLCO1B1Q9Y6L6 691 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 OR6C6A6NF89 314 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 RFPL4AA6NLU0 287 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 RFPL4AL1F8VTS6 287 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 SIAH2O43255 324 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 AQP8O94778 261 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 SLC16A8O95907 504 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 GALTP07902 379 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 ZNF16P17020 682 aaPredicted RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 IL13RA1P78552 427 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 ZNF239Q16600 458 aaKnown RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 PRRT3Q5FWE3 981 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 C6orf132Q5T0Z8 1188 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 LEMD1Q68G75 181 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 LPCAT3Q6P1A2 487 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 FNDC9Q8TBE3 224 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 KLK6Q92876 244 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 C1QTNF2Q9BXJ5 285 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 TUBB1Q9H4B7 451 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 DMRT3Q9NQL9 472 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 ABRACLQ9P1F3 81 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 CACNG4Q9UBN1 327 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 PLAGL1Q9UM63 463 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 IGKV6-21A0A0C4DH24 114 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 COCHO43405 550 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 SYNGR4O95473 234 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 SDC1P18827 310 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 C21orf58P58505 322 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 SUMO1P63165 101 aaKnown RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 MEF2AQ02078 507 aaPredicted RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 PLP2Q04941 152 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 OR5I1Q13606 314 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 PTPRCAPQ14761 206 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 COL5A1-AS1Q5SY13 56 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 MAMDC2Q7Z304 686 aaPredicted RBP5.32□□□□□ -1.56
VCAN-201ENST00000265077 MAVSQ7Z434 540 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 SERINC5Q86VE9 423 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 OR5D16Q8NGK9 328 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 CD200R1Q8TD46 325 aa5.32□□□□□ -1.56
VCAN-201ENST00000265077 HMGB4Q8WW32 186 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms