RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 MRPS18CQ9Y3D5 142 aaKnown RBP20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 RFPL3SP0C7P2 107 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 SHC1P29353 583 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 SDHAP31040 664 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 MTNR1AP48039 350 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 RAET1LQ5VY80 246 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 BORAQ6PGQ7 559 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 GPR141Q7Z602 305 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 KCNE4Q8WWG9 221 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 RASD2Q96D21 266 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 LGALS12Q96DT0 336 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 TMEM80Q96HE8 168 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 Q96M85 177 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 DDOQ99489 341 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 SCNM1Q9BWG6 230 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 HES7Q9BYE0 225 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 TMEM185BQ9H7F4 350 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 ALKBH4Q9NXW9 302 aa20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 H2AFY2Q9P0M6 372 aaPredicted RBP20.61■□□□□ 0.89
SMARCB1-201ENST00000263121 OR2M5A3KFT3 312 aa20.6■□□□□ 0.89
SMARCB1-201ENST00000263121 EFSO43281 561 aa20.6■□□□□ 0.89
SMARCB1-201ENST00000263121 ADORA3P0DMS8 318 aa20.6■□□□□ 0.89
SMARCB1-201ENST00000263121 PAICSP22234 425 aaKnown RBP20.6■□□□□ 0.89
SMARCB1-201ENST00000263121 SLC2A5P22732 501 aa20.6■□□□□ 0.89
SMARCB1-201ENST00000263121 RAB40BQ12829 278 aa20.6■□□□□ 0.89
SMARCB1-201ENST00000263121 KLHL22Q53GT1 634 aa20.6■□□□□ 0.89
SMARCB1-201ENST00000263121 EMC4Q5J8M3 183 aa20.6■□□□□ 0.89
SMARCB1-201ENST00000263121 CYB561A3Q8NBI2 242 aa20.6■□□□□ 0.89
SMARCB1-201ENST00000263121 FAM98AQ8NCA5 519 aaKnown RBP20.6■□□□□ 0.89
SMARCB1-201ENST00000263121 SDR9C7Q8NEX9 313 aa20.6■□□□□ 0.89
SMARCB1-201ENST00000263121 OR52I1Q8NGK6 324 aa20.6■□□□□ 0.89
SMARCB1-201ENST00000263121 TSPAN32Q96QS1 320 aa20.6■□□□□ 0.89
SMARCB1-201ENST00000263121 HDGFL3Q9Y3E1 203 aa20.6■□□□□ 0.89
SMARCB1-201ENST00000263121 COMMD3-BMI1R4GMX3 469 aa20.6■□□□□ 0.89
SMARCB1-201ENST00000263121 TEX13CA0A0J9YWL9 993 aa20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 IRGMA1A4Y4 181 aa20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 M0R3G1 203 aa20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 SEC14L2O76054 403 aa20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 ACVR2AP27037 513 aa20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 B3GALT5-AS1P59052 145 aa20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 C19orf57Q0VDD7 668 aa20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 ZP4Q12836 540 aa20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 GPR139Q6DWJ6 353 aa20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 CCDC81Q6ZN84 652 aa20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 MEPCEQ7L2J0 689 aaKnown RBP20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 SULF2Q8IWU5 870 aa20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 LSM14AQ8ND56 463 aaKnown RBP20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 NPEPL1Q8NDH3 523 aa20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 OR13F1Q8NGS4 319 aa20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 C9orf43Q8TAL5 461 aaPredicted RBP20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 HAS2Q92819 552 aa20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 OTULINQ96BN8 352 aa20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 PIGQQ9BRB3 760 aa20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 OR2B2Q9GZK3 357 aa20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 FGF20Q9NP95 211 aaPredicted RBP20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 INIPQ9NRY2 104 aa20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 DIMT1Q9UNQ2 313 aaKnown RBP20.59■□□□□ 0.89
SMARCB1-201ENST00000263121 CCDC182A6NF36 153 aa20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 ZNF99A8MXY4 864 aaPredicted RBP20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 TLX3O43711 291 aaPredicted RBP20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 NME2P1O60361 137 aa20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 INMTO95050 263 aa20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 NME2P22392 152 aa20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 GTF2E2P29084 291 aaKnown RBP20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 TTKP33981 857 aa20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 TMED1Q13445 227 aa20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 UBE2UQ5VVX9 321 aa20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 RNLSQ5VYX0 342 aa20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 H1FNTQ75WM6 255 aaPredicted RBP20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 ZNF248Q8NDW4 579 aa20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 RORBQ92753 470 aa20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 KISS1RQ969F8 398 aaPredicted RBP20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 OR5B2Q96R09 309 aa20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 CHST11Q9NPF2 352 aa20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 TAS2R16Q9NYV7 291 aa20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 WARS2Q9UGM6 360 aaKnown RBP20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 CEPT1Q9Y6K0 416 aa20.58■□□□□ 0.89
SMARCB1-201ENST00000263121 C11orf98E9PRG8 122 aa20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 NCKAP5O14513 1909 aa20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 RNF13O43567 381 aa20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 OR6A2O95222 327 aa20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 IGHMP01871 453 aa20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 SP1P08047 785 aa20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 SFTPDP35247 375 aa20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 CCL11P51671 97 aa20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 GP2P55259 537 aaKnown RBP20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 DEFB109BQ30KR1 87 aa20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 TMEM176BQ3YBM2 270 aaPredicted RBP20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 SLC25A25Q6KCM7 469 aa20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 FAM83FQ8NEG4 500 aaPredicted RBP20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 FDCSPQ8NFU4 85 aa20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 FCGR1BQ92637 280 aa20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 NMNAT3Q96T66 252 aa20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 NMNAT2Q9BZQ4 307 aa20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 GRHPRQ9UBQ7 328 aa20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 ZNF346Q9UL40 294 aaKnown RBP20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 EXOGQ9Y2C4 368 aaKnown RBP20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 KLF13Q9Y2Y9 288 aaPredicted RBP20.58■□□□□ 0.88
SMARCB1-201ENST00000263121 A0A1W2PNR3 127 aa20.57■□□□□ 0.88
SMARCB1-201ENST00000263121 MS4A18H0YCH9 400 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms