RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 CA10Q9NS85 328 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 NOX1Q9Y5S8 564 aa10.69□□□□□ -0.7
TRAF4-202ENST00000262396 SH3PXD2BA1X283 911 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 NR5A2O00482 541 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 UPK3AO75631 287 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 PNMTP11086 282 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 PRG2P13727 222 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 HOXB1P14653 301 aaPredicted RBP10.68□□□□□ -0.7
TRAF4-202ENST00000262396 SRD5A1P18405 259 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 HOXC5Q00444 222 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 LGALS3BPQ08380 585 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 GCNT6Q5T4J0 391 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 CARD17Q5XLA6 110 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 C5orf46Q6UWT4 87 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 SNX32Q86XE0 403 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 ANKS4BQ8N8V4 417 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 ZIC4Q8N9L1 334 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 PIK3C3Q8NEB9 887 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 ANKRD27Q96NW4 1050 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 OXGR1Q96P68 337 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 ZNF317Q96PQ6 595 aaPredicted RBP10.68□□□□□ -0.7
TRAF4-202ENST00000262396 EPYCQ99645 322 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 ASPNQ9BXN1 380 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 TMEM27Q9HBJ8 222 aa10.68□□□□□ -0.7
TRAF4-202ENST00000262396 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.68□□□□□ -0.7
TRAF4-202ENST00000262396 DSPPQ9NZW4 1301 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 LOC390937A0A1W2PQ73 354 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 ZNF726A6NNF4 738 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 EVPLLA8MZ36 301 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 PHF1O43189 567 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-202ENST00000262396 SNNO75324 88 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-202ENST00000262396 VIMP08670 466 aaKnown RBP10.67□□□□□ -0.7
TRAF4-202ENST00000262396 IGHV4-31P0DP07 118 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 CD79AP11912 226 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 PPIBP23284 216 aaKnown RBP10.67□□□□□ -0.7
TRAF4-202ENST00000262396 LSP1P33241 339 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 IDH3GP51553 393 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-202ENST00000262396 WDR4P57081 412 aaKnown RBP10.67□□□□□ -0.7
TRAF4-202ENST00000262396 ARF1P84077 181 aaKnown RBP10.67□□□□□ -0.7
TRAF4-202ENST00000262396 NAAAQ02083 359 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 FADDQ13158 208 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 MFSD13AQ14CX5 517 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 RGNQ15493 299 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 ALG10BQ5I7T1 473 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 FAM69AQ5T7M9 428 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 SLC2A7Q6PXP3 512 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 SPATA21Q7Z572 469 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 NET1Q7Z628 596 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-202ENST00000262396 LSRQ86X29 649 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-202ENST00000262396 EPHX4Q8IUS5 362 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 UEVLDQ8IX04 471 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 OR9I1Q8NGQ6 314 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 NFKBIDQ8NI38 313 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 LRRC8CQ8TDW0 803 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 DNAJA4Q8WW22 397 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-202ENST00000262396 DYDC1Q8WWB3 177 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 NANOS1Q8WY41 292 aaKnown RBP10.67□□□□□ -0.7
TRAF4-202ENST00000262396 BCL2L2Q92843 193 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-202ENST00000262396 MAL2Q969L2 176 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 KTI12Q96EK9 354 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-202ENST00000262396 FOXN4Q96NZ1 517 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 SORCS2Q96PQ0 1159 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 OR52B2Q96RD2 323 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 ZNF607Q96SK3 696 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 LINC00470Q9BZP3 86 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 CRLF2Q9HC73 371 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 A4GALTQ9NPC4 353 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 SDR39U1Q9NRG7 319 aaPredicted RBP10.67□□□□□ -0.7
TRAF4-202ENST00000262396 SLC6A13Q9NSD5 602 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 RCE1Q9Y256 329 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 POFUT2Q9Y2G5 429 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 SPEF1Q9Y4P9 236 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 PCDHB14Q9Y5E9 798 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 USH1CQ9Y6N9 552 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 SONP18583 2426 aaKnown RBP10.67□□□□□ -0.7
TRAF4-202ENST00000262396 ABCA1O95477 2261 aa10.67□□□□□ -0.7
TRAF4-202ENST00000262396 ZANQ9Y493 2812 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 DNHD1Q96M86 4753 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 TRAV36DV7A0A075B6V5 113 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 ARPC4-TTLL3A0A0A6YYG9 625 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 PRORSD1PA6NEY8 169 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 hCG_2039718K7EN88 272 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 M0R082 166 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 M0R3G1 203 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 SERPINB7O75635 380 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 SERPINI2O75830 405 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 OR6A2O95222 327 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 TGFAP01135 160 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 CECR9P0C854 216 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 NPR2P20594 1047 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 SLC6A2P23975 617 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 GRPRP30550 384 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 ARR3P36575 388 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 NR4A2P43354 598 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 RGS8P57771 180 aaPredicted RBP10.66□□□□□ -0.7
TRAF4-202ENST00000262396 SWI5Q1ZZU3 235 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 CEACAM16Q2WEN9 425 aa10.66□□□□□ -0.7
TRAF4-202ENST00000262396 GKAP1Q5VSY0 366 aaPredicted RBP10.66□□□□□ -0.7
TRAF4-202ENST00000262396 H1FNTQ75WM6 255 aaPredicted RBP10.66□□□□□ -0.7
TRAF4-202ENST00000262396 RANBP3LQ86VV4 465 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms