RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 ARAFP10398 606 aa16.58■□□□□ 0.24
TM6SF1-201ENST00000258909 ETS2P15036 469 aa16.58■□□□□ 0.24
TM6SF1-201ENST00000258909 PRKAR1BP31321 381 aa16.58■□□□□ 0.24
TM6SF1-201ENST00000258909 CDK6Q00534 326 aa16.58■□□□□ 0.24
TM6SF1-201ENST00000258909 AGKQ53H12 422 aa16.58■□□□□ 0.24
TM6SF1-201ENST00000258909 RNF217Q8TC41 542 aa16.58■□□□□ 0.24
TM6SF1-201ENST00000258909 BCL2L2Q92843 193 aaPredicted RBP16.58■□□□□ 0.24
TM6SF1-201ENST00000258909 CCDC28BQ9BUN5 200 aa16.58■□□□□ 0.24
TM6SF1-201ENST00000258909 A0A096LNT2 108 aa16.57■□□□□ 0.24
TM6SF1-201ENST00000258909 H7C417 338 aa16.57■□□□□ 0.24
TM6SF1-201ENST00000258909 M0R082 166 aa16.57■□□□□ 0.24
TM6SF1-201ENST00000258909 ZNF43P17038 809 aa16.57■□□□□ 0.24
TM6SF1-201ENST00000258909 AQP1P29972 269 aa16.57■□□□□ 0.24
TM6SF1-201ENST00000258909 UBE2NP61088 152 aaKnown RBP16.57■□□□□ 0.24
TM6SF1-201ENST00000258909 ROR2Q01974 943 aaKnown RBP16.57■□□□□ 0.24
TM6SF1-201ENST00000258909 CHRNB3Q05901 458 aa16.57■□□□□ 0.24
TM6SF1-201ENST00000258909 TTMPQ5BVD1 217 aa16.57■□□□□ 0.24
TM6SF1-201ENST00000258909 HMBOX1Q6NT76 420 aa16.57■□□□□ 0.24
TM6SF1-201ENST00000258909 REEP3Q6NUK4 255 aa16.57■□□□□ 0.24
TM6SF1-201ENST00000258909 ZNF417Q8TAU3 575 aa16.57■□□□□ 0.24
TM6SF1-201ENST00000258909 NANOS1Q8WY41 292 aaKnown RBP16.57■□□□□ 0.24
TM6SF1-201ENST00000258909 SLC35B4Q969S0 331 aa16.57■□□□□ 0.24
TM6SF1-201ENST00000258909 SLC38A2Q96QD8 506 aa16.57■□□□□ 0.24
TM6SF1-201ENST00000258909 ZNF587Q96SQ5 575 aaPredicted RBP16.57■□□□□ 0.24
TM6SF1-201ENST00000258909 WFDC6Q9BQY6 131 aa16.57■□□□□ 0.24
TM6SF1-201ENST00000258909 B3GAT1Q9P2W7 334 aa16.57■□□□□ 0.24
TM6SF1-201ENST00000258909 IGKV1D-42A0A075B6H8 117 aa16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 TRBV5-3A0A0A0MS03 114 aa16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 TLX2O43763 284 aaPredicted RBP16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 GRPRP30550 384 aa16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 IL1RL1Q01638 556 aa16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 C1DQ13901 141 aaKnown RBP16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 SCARB2Q14108 478 aa16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 MST1LQ2TV78 715 aa16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 ALG10BQ5I7T1 473 aa16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 C6orf89Q6UWU4 347 aa16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 LSMEM1Q8N8F7 131 aa16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 FAM168AQ92567 244 aa16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 THOC1Q96FV9 657 aaKnown RBP16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 BOD1Q96IK1 185 aa16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 ATP6V1G3Q96LB4 118 aa16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 NELFAQ9H3P2 528 aa16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 SEC61A2Q9H9S3 476 aa16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 OBP2BQ9NPH6 170 aa16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 PMF1-BGLAPU3KQ54 211 aa16.56■□□□□ 0.24
TM6SF1-201ENST00000258909 OR6C65A6NJZ3 312 aa16.55■□□□□ 0.24
TM6SF1-201ENST00000258909 ZNF432O94892 652 aa16.55■□□□□ 0.24
TM6SF1-201ENST00000258909 DSCR9P59020 149 aa16.55■□□□□ 0.24
TM6SF1-201ENST00000258909 ARF1P84077 181 aaKnown RBP16.55■□□□□ 0.24
TM6SF1-201ENST00000258909 ANKRD16Q6P6B7 361 aa16.55■□□□□ 0.24
TM6SF1-201ENST00000258909 DHRS4L2Q6PKH6 230 aa16.55■□□□□ 0.24
TM6SF1-201ENST00000258909 VHLLQ6RSH7 139 aa16.55■□□□□ 0.24
TM6SF1-201ENST00000258909 KRT73Q86Y46 540 aa16.55■□□□□ 0.24
TM6SF1-201ENST00000258909 DYDC1Q8WWB3 177 aa16.55■□□□□ 0.24
TM6SF1-201ENST00000258909 SLC38A4Q969I6 547 aa16.55■□□□□ 0.24
TM6SF1-201ENST00000258909 ZNF837Q96EG3 531 aaPredicted RBP16.55■□□□□ 0.24
TM6SF1-201ENST00000258909 OXGR1Q96P68 337 aa16.55■□□□□ 0.24
TM6SF1-201ENST00000258909 KCNS3Q9BQ31 491 aa16.55■□□□□ 0.24
TM6SF1-201ENST00000258909 LINC00470Q9BZP3 86 aa16.55■□□□□ 0.24
TM6SF1-201ENST00000258909 AIM2O14862 343 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 OR2T1O43869 369 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 CECR9P0C854 216 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 BMP4P12644 408 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 PPIBP23284 216 aaKnown RBP16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 EFNA4P52798 201 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 ADRM1Q16186 407 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 SWI5Q1ZZU3 235 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 TMEM249Q2WGJ8 235 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 C1QTNF12Q5T7M4 302 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 FAM69AQ5T7M9 428 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 C10orf105Q8TEF2 133 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 TNFRSF13CQ96RJ3 184 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 SPATA5L1Q9BVQ7 753 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 C12orf10Q9HB07 376 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 RCE1Q9Y256 329 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 TRAV36DV7A0A075B6V5 113 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 ARPC4-TTLL3A0A0A6YYG9 625 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 A8MV72 311 aaPredicted RBP16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 TPST2O60704 377 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 SLC43A1O75387 559 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 SEC14L2O76054 403 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 HPRP00739 348 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 CRYAAP02489 173 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 CELA3BP08861 270 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 GPX2P18283 190 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 SLC6A2P23975 617 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 CALCRP30988 508 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 RGS8P57771 180 aaPredicted RBP16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 NCALDP61601 193 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 NAAAQ02083 359 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 SQLEQ14534 574 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 OR1Q1Q15612 314 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 ULK3Q6PHR2 472 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 H1FNTQ75WM6 255 aaPredicted RBP16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 MYPOPQ86VE0 399 aaPredicted RBP16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 GPR137CQ8N3F9 429 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 DNAJA4Q8WW22 397 aaPredicted RBP16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 TMEM38AQ9H6F2 299 aa16.54■□□□□ 0.24
TM6SF1-201ENST00000258909 CRLF2Q9HC73 371 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms