RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 VRK1Q99986 396 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 SLC19A3Q9BZV2 496 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 UNKLQ9H9P5 680 aaKnown RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 KCNK12Q9HB15 430 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 CNIH4Q9P003 139 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 KCMF1Q9P0J7 381 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 PRODH2Q9UF12 536 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 CA14Q9ULX7 337 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 CLEC4AQ9UMR7 237 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 RCE1Q9Y256 329 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF175Q9Y473 711 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 SHISA3A0PJX4 238 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ELOA3DA6NLF2 546 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF593O00488 134 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 AKR7A2O43488 359 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 NUDT21O43809 227 aaKnown RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 RAD1O60671 282 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 SLC25A12O75746 678 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 MAOBP27338 520 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 MGAT2Q10469 447 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 MYBPHQ13203 477 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 GPR68Q15743 365 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ELOA3BQ3SY89 546 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 Q499Y3 187 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 VWA2Q5GFL6 755 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 KHDC1LQ5JSQ8 128 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 RTL6Q6ICC9 239 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ULK3Q6PHR2 472 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 LINC00114Q6XXX2 140 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 TMPRSS11FQ6ZWK6 438 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 GPAT4Q86UL3 456 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ELOA3Q8NG57 546 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 RNASE11Q8TAA1 199 aaKnown RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 LCN9Q8WX39 176 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ASB12Q8WXK4 309 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 DIO2Q92813 273 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 CLIP3Q96DZ5 547 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 PHB2Q99623 299 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ORAI3Q9BRQ5 295 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 UQCC2Q9BRT2 126 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF471Q9BX82 626 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 NARFLQ9H6Q4 476 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 PRSS16Q9NQE7 514 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 TMEM74BQ9NUR3 256 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 OR6C2Q9NZP2 312 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 GTF2A1LQ9UNN4 478 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 NOP16Q9Y3C1 178 aaKnown RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 OR10H1Q9Y4A9 318 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 FER1L5A0AVI2 2057 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 A0A087WV62 115 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 SMIM30A4D0T7 59 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 CHURC1-FNTBB4DL54 471 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ATP6V1G2-DDX39BF2Z307 99 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 TOR1AO14656 332 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 HEXAP06865 529 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ACRP10323 421 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 NR2C1P13056 603 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 CD34P28906 385 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 SRP14P37108 136 aaKnown RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 P2RY2P41231 377 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 VSX2P58304 361 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ERVK-21P61565 698 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 FOXK2Q01167 660 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 AIMP2Q13155 320 aaKnown RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 CDK5R1Q15078 307 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 EMC4Q5J8M3 183 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 APOOLQ6UXV4 268 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 SHFQ7M4L6 423 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 NR2C2APQ86WQ0 139 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 SKA3Q8IX90 412 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 FBXL6Q8N531 539 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ACOT4Q8N9L9 421 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 SYNPRQ8TBG9 265 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 GHSRQ92847 366 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 HLA-CQ95604 372 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 HRASLSQ9HDD0 168 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 SLC6A20Q9NP91 592 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ACTR10Q9NZ32 417 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF337Q9Y3M9 751 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 INSL6Q9Y581 213 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 HRH3Q9Y5N1 445 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ACOD1A6NK06 481 aa3.81□□□□□ -1.8
UBE4A-201ENST00000252108 ARPC5O15511 151 aa3.81□□□□□ -1.8
UBE4A-201ENST00000252108 SSX4O60224 188 aa3.81□□□□□ -1.8
UBE4A-201ENST00000252108 NDUFB6O95139 128 aa3.81□□□□□ -1.8
UBE4A-201ENST00000252108 MT-ND4P03905 459 aa3.81□□□□□ -1.8
UBE4A-201ENST00000252108 EIF4EP06730 217 aaKnown RBP3.81□□□□□ -1.8
UBE4A-201ENST00000252108 ACSM4P0C7M7 580 aa3.81□□□□□ -1.8
UBE4A-201ENST00000252108 EPXP11678 715 aa3.81□□□□□ -1.8
UBE4A-201ENST00000252108 RPA2P15927 270 aa3.81□□□□□ -1.8
UBE4A-201ENST00000252108 MAOAP21397 527 aa3.81□□□□□ -1.8
UBE4A-201ENST00000252108 TBXA2RP21731 343 aa3.81□□□□□ -1.8
UBE4A-201ENST00000252108 CERS1P27544 350 aa3.81□□□□□ -1.8
UBE4A-201ENST00000252108 ADH6P28332 368 aa3.81□□□□□ -1.8
UBE4A-201ENST00000252108 ACVR1BP36896 505 aa3.81□□□□□ -1.8
UBE4A-201ENST00000252108 CSNK1G2P78368 415 aa3.81□□□□□ -1.8
UBE4A-201ENST00000252108 HOXC5Q00444 222 aa3.81□□□□□ -1.8
UBE4A-201ENST00000252108 MC2RQ01718 297 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms