RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 PRAMEF2O60811 474 aa23.32■■□□□ 1.32
RAB40C-201ENST00000248139 HPXP02790 462 aa23.32■■□□□ 1.32
RAB40C-201ENST00000248139 PRTGQ2VWP7 1150 aa23.32■■□□□ 1.32
RAB40C-201ENST00000248139 LINC01590Q5TEZ4 76 aa23.32■■□□□ 1.32
RAB40C-201ENST00000248139 RNF166Q96A37 237 aaPredicted RBP23.32■■□□□ 1.32
RAB40C-201ENST00000248139 RCE1Q9Y256 329 aa23.32■■□□□ 1.32
RAB40C-201ENST00000248139 ZNF337Q9Y3M9 751 aa23.32■■□□□ 1.32
RAB40C-201ENST00000248139 HS3ST3A1Q9Y663 406 aa23.32■■□□□ 1.32
RAB40C-201ENST00000248139 C7orf66A4D0T2 115 aa23.31■■□□□ 1.32
RAB40C-201ENST00000248139 CEP76Q8TAP6 659 aa23.31■■□□□ 1.32
RAB40C-201ENST00000248139 HYLS1Q96M11 299 aa23.31■■□□□ 1.32
RAB40C-201ENST00000248139 NUBP2Q9Y5Y2 271 aa23.31■■□□□ 1.32
RAB40C-201ENST00000248139 ELOA3DA6NLF2 546 aaPredicted RBP23.31■■□□□ 1.32
RAB40C-201ENST00000248139 TOXO94900 526 aa23.31■■□□□ 1.32
RAB40C-201ENST00000248139 POU3F3P20264 500 aaPredicted RBP23.31■■□□□ 1.32
RAB40C-201ENST00000248139 DRD1P21728 446 aa23.31■■□□□ 1.32
RAB40C-201ENST00000248139 LGALS3BPQ08380 585 aa23.31■■□□□ 1.32
RAB40C-201ENST00000248139 GGTLC2Q14390 218 aa23.31■■□□□ 1.32
RAB40C-201ENST00000248139 ELOA3BQ3SY89 546 aa23.31■■□□□ 1.32
RAB40C-201ENST00000248139 ELOA3Q8NG57 546 aa23.31■■□□□ 1.32
RAB40C-201ENST00000248139 CDC14CA4D256 554 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 WISP1O95388 367 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 H2AFB2P0C5Z0 115 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 SSTR2P30874 369 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 GFERP55789 205 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 MRPS21P82921 87 aaKnown RBP23.3■■□□□ 1.32
RAB40C-201ENST00000248139 LTBQ06643 244 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 FAM199XQ6PEV8 388 aaPredicted RBP23.3■■□□□ 1.32
RAB40C-201ENST00000248139 SLITRK4Q8IW52 837 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 OR8K3Q8NH51 312 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 OR52I2Q8NH67 350 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 G6PC3Q9BUM1 346 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 LRRC61Q9BV99 259 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 SYNDIG1Q9H7V2 258 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 LIN7BQ9HAP6 207 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 CAMK2AQ9UQM7 478 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 FAM221BA6H8Z2 402 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 MST1P26927 711 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 CTXN1P60606 82 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 KLF9Q13886 244 aaPredicted RBP23.3■■□□□ 1.32
RAB40C-201ENST00000248139 GSG1Q2KHT4 349 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 SLC25A38Q96DW6 304 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 NKX3-1Q99801 234 aaPredicted RBP23.3■■□□□ 1.32
RAB40C-201ENST00000248139 NMNAT2Q9BZQ4 307 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 RTN4RQ9BZR6 473 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 NRSN2Q9GZP1 204 aa23.3■■□□□ 1.32
RAB40C-201ENST00000248139 RP1P56715 2156 aa23.29■■□□□ 1.32
RAB40C-201ENST00000248139 ZNF593O00488 134 aaPredicted RBP23.29■■□□□ 1.32
RAB40C-201ENST00000248139 KCNAB1Q14722 419 aa23.29■■□□□ 1.32
RAB40C-201ENST00000248139 ZNF615Q8N8J6 731 aa23.29■■□□□ 1.32
RAB40C-201ENST00000248139 ZSCAN1Q8NBB4 408 aa23.29■■□□□ 1.32
RAB40C-201ENST00000248139 LSM14AQ8ND56 463 aaKnown RBP23.29■■□□□ 1.32
RAB40C-201ENST00000248139 SPRTNQ9H040 489 aaPredicted RBP23.29■■□□□ 1.32
RAB40C-201ENST00000248139 ZCCHC4Q9H5U6 513 aa23.29■■□□□ 1.32
RAB40C-201ENST00000248139 PNO1Q9NRX1 252 aaKnown RBP23.29■■□□□ 1.32
RAB40C-201ENST00000248139 ASXL3Q9C0F0 2248 aa23.29■■□□□ 1.32
RAB40C-201ENST00000248139 EFCAB7A8K855 629 aa23.29■■□□□ 1.32
RAB40C-201ENST00000248139 ZNF879B4DU55 563 aa23.29■■□□□ 1.32
RAB40C-201ENST00000248139 CLDN4O14493 209 aa23.29■■□□□ 1.32
RAB40C-201ENST00000248139 PLA2G7Q13093 441 aa23.29■■□□□ 1.32
RAB40C-201ENST00000248139 PRAMEF17Q5VTA0 474 aa23.29■■□□□ 1.32
RAB40C-201ENST00000248139 OR7G1Q8NGA0 311 aa23.29■■□□□ 1.32
RAB40C-201ENST00000248139 UCKL1Q9NWZ5 548 aa23.29■■□□□ 1.32
RAB40C-201ENST00000248139 HPGDP15428 266 aa23.28■■□□□ 1.32
RAB40C-201ENST00000248139 PITPNAQ00169 270 aa23.28■■□□□ 1.32
RAB40C-201ENST00000248139 OVCH1Q7RTY7 1134 aa23.28■■□□□ 1.32
RAB40C-201ENST00000248139 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.28■■□□□ 1.32
RAB40C-201ENST00000248139 NANSQ9NR45 359 aa23.28■■□□□ 1.32
RAB40C-201ENST00000248139 RXFP3Q9NSD7 469 aa23.28■■□□□ 1.32
RAB40C-201ENST00000248139 ING4Q9UNL4 249 aa23.28■■□□□ 1.32
RAB40C-201ENST00000248139 MRPS33Q9Y291 106 aaKnown RBP23.28■■□□□ 1.32
RAB40C-201ENST00000248139 IFITM5A6NNB3 132 aa23.28■■□□□ 1.32
RAB40C-201ENST00000248139 SSNA1O43805 119 aa23.28■■□□□ 1.32
RAB40C-201ENST00000248139 FCER2P06734 321 aa23.28■■□□□ 1.32
RAB40C-201ENST00000248139 GRK6P43250 576 aa23.28■■□□□ 1.32
RAB40C-201ENST00000248139 EGR4Q05215 589 aa23.28■■□□□ 1.32
RAB40C-201ENST00000248139 OR10AC1Q8NH08 325 aa23.28■■□□□ 1.32
RAB40C-201ENST00000248139 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.28■■□□□ 1.32
RAB40C-201ENST00000248139 KTI12Q96EK9 354 aaPredicted RBP23.28■■□□□ 1.32
RAB40C-201ENST00000248139 ADAD1Q96M93 576 aaKnown RBP23.28■■□□□ 1.32
RAB40C-201ENST00000248139 TGM7Q96PF1 710 aa23.28■■□□□ 1.32
RAB40C-201ENST00000248139 ULBP3Q9BZM4 244 aa23.28■■□□□ 1.32
RAB40C-201ENST00000248139 OR10A4Q9H209 315 aa23.28■■□□□ 1.32
RAB40C-201ENST00000248139 SOHLH2Q9NX45 425 aa23.28■■□□□ 1.32
RAB40C-201ENST00000248139 STMN3Q9NZ72 180 aa23.28■■□□□ 1.32
RAB40C-201ENST00000248139 OR5K4A6NMS3 321 aa23.27■■□□□ 1.32
RAB40C-201ENST00000248139 C17orf105B2RV13 164 aa23.27■■□□□ 1.32
RAB40C-201ENST00000248139 MEN1O00255 615 aa23.27■■□□□ 1.32
RAB40C-201ENST00000248139 GATBO75879 557 aaKnown RBP23.27■■□□□ 1.32
RAB40C-201ENST00000248139 CLPSP04118 112 aa23.27■■□□□ 1.32
RAB40C-201ENST00000248139 TMIGD3P0DMS9 266 aaPredicted RBP23.27■■□□□ 1.32
RAB40C-201ENST00000248139 KLHL26Q53HC5 615 aa23.27■■□□□ 1.32
RAB40C-201ENST00000248139 CREB3L2Q70SY1 520 aa23.27■■□□□ 1.32
RAB40C-201ENST00000248139 TPSD1Q9BZJ3 242 aa23.27■■□□□ 1.32
RAB40C-201ENST00000248139 ZNF281Q9Y2X9 895 aa23.27■■□□□ 1.32
RAB40C-201ENST00000248139 THADAQ6YHU6 1953 aa23.27■■□□□ 1.32
RAB40C-201ENST00000248139 GLCEO94923 617 aa23.27■■□□□ 1.32
RAB40C-201ENST00000248139 RPS4XP62701 263 aaKnown RBP23.27■■□□□ 1.32
RAB40C-201ENST00000248139 GAS6Q14393 721 aa23.27■■□□□ 1.32
RAB40C-201ENST00000248139 LIPNQ5VXI9 398 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms