RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 SERTAD3Q9UJW9 196 aa13.71□□□□□ -0.22
UBE2D4-201ENST00000222402 PPIEQ9UNP9 301 aaKnown RBP13.71□□□□□ -0.22
UBE2D4-201ENST00000222402 ARPC1BO15143 372 aaKnown RBP13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 ECDO95905 644 aaPredicted RBP13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 C1QBP02746 253 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 CSN2P05814 226 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 CD53P19397 219 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 PGCP20142 388 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 MAGEB1P43366 347 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 GFERP55789 205 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 ZNF85Q03923 595 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 EFR3AQ14156 821 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 HYAL4Q2M3T9 481 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 OR5M10Q6IEU7 315 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 SLC35D2Q76EJ3 337 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 MGAT4CQ9UBM8 478 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 PILRAQ9UKJ1 303 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 OBSL1O75147 1896 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 UTS2O95399 124 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 FBLP22087 321 aaKnown RBP13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 CD38P28907 300 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 CD1CP29017 333 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 GUCA1AP43080 201 aaPredicted RBP13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 PSMA6P60900 246 aaKnown RBP13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 ACSM1Q08AH1 577 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 CEBPEQ15744 281 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 LIPNQ5VXI9 398 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 CHST4Q8NCG5 386 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 LMAN1LQ9HAT1 526 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 A0A0A6YYJ9 748 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 IDSB3KWA1 339 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 GLCEO94923 617 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 EPXP11678 715 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 HNRNPKP61978 463 aaKnown RBP eCLIP13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 IFITM2Q01629 132 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 HSF2Q03933 536 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 GPBAR1Q8TDU6 330 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 TSPAN10Q9H1Z9 355 aaPredicted RBP13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 LIN7BQ9HAP6 207 aa13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 ZNF223Q9UK11 482 aaPredicted RBP13.7□□□□□ -0.22
UBE2D4-201ENST00000222402 EPOPA6NHQ4 379 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 SSTR2P30874 369 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 EVI2BP34910 448 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 C4orf46Q504U0 113 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 ZNF767PQ75MW2 155 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 MAMDC2Q7Z304 686 aaPredicted RBP13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 SHISA5Q8N114 240 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 SDR16C5Q8N3Y7 309 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 ARIH2OSQ8N7S6 290 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 INTS14Q96SY0 518 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 B3GNT4Q9C0J1 378 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 CUTCQ9NTM9 273 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 CAMK2AQ9UQM7 478 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 DTX4Q9Y2E6 619 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 DENND4CQ5VZ89 1909 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 SPAG17Q6Q759 2223 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 HTR4Q13639 388 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 SLC6A19Q695T7 634 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 LRFN4Q6PJG9 635 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 SYS1Q8N2H4 156 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 GPR148Q8TDV2 347 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 CCDC86Q9H6F5 360 aaKnown RBP13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 GMEB2Q9UKD1 530 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 I3L521 148 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 SMAD9O15198 467 aaKnown RBP13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 LANCL1O43813 399 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 NSA2O95478 260 aaKnown RBP13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 IFNA7P01567 189 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 CTSBP07858 339 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 GALP22466 123 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 HSD17B7P56937 341 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 UBE2NLQ5JXB2 153 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 APOOLQ6UXV4 268 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 CMIPQ8IY22 773 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 FTMTQ8N4E7 242 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 ZFAND1Q8TCF1 268 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 TMEM106AQ96A25 262 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 OR2M2Q96R28 347 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 LMF1Q96S06 567 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 AUNIPQ9H7T9 357 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 ZC4H2Q9NQZ6 224 aa13.69□□□□□ -0.22
UBE2D4-201ENST00000222402 ZNF106Q9H2Y7 1883 aaKnown RBP13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 MEIS3P1A6NDR6 274 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 SMIM10L1P0DMW3 83 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 GTF2F2P13984 249 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 BTG1P62324 171 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 LRRN1Q6UXK5 716 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 DNAAF1Q8NEP3 725 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 C15orf40Q8WUR7 153 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 CHAC2Q8WUX2 184 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 SMIM10Q96HG1 83 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 ULBP3Q9BZM4 244 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 NXF5Q9H1B4 397 aaKnown RBP13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 ZNF224Q9NZL3 707 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 A0A087WUJ7 227 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 CPED1A4D0V7 1026 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 OR6C68A6NDL8 312 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 HCRTR1O43613 425 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 SLC16A7O60669 478 aa13.68□□□□□ -0.22
UBE2D4-201ENST00000222402 SQSTM1Q13501 440 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms