RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 DOCK8Q8NF50 2099 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 RPS10-NUDT3A0A1W2PQS6 291 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 BLACEA4D250 179 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 KHDRBS3O75525 346 aaKnown RBP12.16□□□□□ -0.46
SRP54-201ENST00000216774 APEHP13798 732 aaKnown RBP12.16□□□□□ -0.46
SRP54-201ENST00000216774 C4BPBP20851 252 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 VEGFCP49767 419 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 IGLV3-21P80748 117 aaPredicted RBP12.16□□□□□ -0.46
SRP54-201ENST00000216774 TMEM255AQ5JRV8 349 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 TMEM69Q5SWH9 247 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 SLC16A9Q7RTY1 509 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 OOSP2Q86WS3 158 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 UXS1Q8NBZ7 420 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 ZNF784Q8NCA9 323 aaPredicted RBP12.16□□□□□ -0.46
SRP54-201ENST00000216774 GPBAR1Q8TDU6 330 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 PATE1Q8WXA2 126 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 C3orf49Q96BT1 292 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 MAP6Q96JE9 813 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 RPP25Q9BUL9 199 aaKnown RBP12.16□□□□□ -0.46
SRP54-201ENST00000216774 BEX1Q9HBH7 125 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 NUP50Q9UKX7 468 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 FLVCR2Q9UPI3 526 aa12.16□□□□□ -0.46
SRP54-201ENST00000216774 ATG2AQ2TAZ0 1938 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 KIR2DS5A0A0G2JLQ3 304 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 A0A0G2JNG1 304 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 B8ZZF3 427 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 KIR2DS3K7RE56 304 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 ACOT7O00154 380 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 RNH1P13489 461 aaKnown RBP12.15□□□□□ -0.46
SRP54-201ENST00000216774 SSTR2P30874 369 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 BLVRAP53004 296 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 DHODHQ02127 395 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 KIR2DS5Q14953 304 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 Q499Y3 187 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 LEG1Q6P5S2 330 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 APOOLQ6UXV4 268 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 GLDNQ6ZMI3 551 aaPredicted RBP12.15□□□□□ -0.46
SRP54-201ENST00000216774 Q6ZTK2 550 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 FAM220AQ7Z4H9 259 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 C1orf216Q8TAB5 229 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 SYNPRQ8TBG9 265 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 LIPHQ8WWY8 451 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 MIB2Q96AX9 1013 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 HAVCR1Q96D42 359 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 SPACA7Q96KW9 195 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 ZNF578Q96N58 590 aaPredicted RBP12.15□□□□□ -0.46
SRP54-201ENST00000216774 RBP7Q96R05 134 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 CDCA3Q99618 268 aaPredicted RBP12.15□□□□□ -0.46
SRP54-201ENST00000216774 OR10A4Q9H209 315 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 MRPL15Q9P015 296 aaKnown RBP12.15□□□□□ -0.46
SRP54-201ENST00000216774 OR5V1Q9UGF6 321 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 MRPS33Q9Y291 106 aaKnown RBP12.15□□□□□ -0.46
SRP54-201ENST00000216774 SLC6A5Q9Y345 797 aa12.15□□□□□ -0.46
SRP54-201ENST00000216774 TUBAL3A6NHL2 446 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 OR5K4A6NMS3 321 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 GRXCR1A8MXD5 290 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 IDSB3KWA1 339 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 HRKO00198 91 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 IMPA2O14732 288 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 CTNSO60931 367 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 EGFP01133 1207 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 CT45A8P0DMV1 189 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 CT45A9P0DMV2 189 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 PNMTP11086 282 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 AKT2P31751 481 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 GRK6P43250 576 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 MECP2P51608 486 aaKnown RBP12.14□□□□□ -0.47
SRP54-201ENST00000216774 ART1P52961 327 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 SCAND1P57086 179 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 RAB14P61106 215 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 SKP1P63208 163 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.14□□□□□ -0.47
SRP54-201ENST00000216774 NDUFAF6Q330K2 333 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 CT45A2Q5DJT8 189 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 LRRN1Q6UXK5 716 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 STAC2Q6ZMT1 411 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 JAZF1Q86VZ6 243 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 FTMTQ8N4E7 242 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 BCORP1Q8N888 145 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 OR4C3Q8NH37 302 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 ORAI1Q96D31 301 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 MRGPRX1Q96LB2 322 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 SEMA6CQ9H3T2 930 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 NOX3Q9HBY0 568 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 TCF7L1Q9HCS4 588 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 TAS2R10Q9NYW0 307 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 TAS2R5Q9NYW4 299 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 LRIT1Q9P2V4 623 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 KLK11Q9UBX7 282 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 HIF3AQ9Y2N7 669 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 MAB21L2Q9Y586 359 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 FANCMQ8IYD8 2048 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 IGKV1D-42A0A075B6H8 117 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 A0A1B0GVT2 93 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 OR5K3A6NET4 321 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 PRR32B1ATL7 298 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 TGFBR3LH3BV60 316 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 M0R233 179 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 MEN1O00255 615 aa12.14□□□□□ -0.47
SRP54-201ENST00000216774 ARPC1BO15143 372 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms