RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 TFPTP0C1Z6 253 aa13.13□□□□□ -0.31
UPK3A-201ENST00000216211 CDH2P19022 906 aaPredicted RBP13.13□□□□□ -0.31
UPK3A-201ENST00000216211 CRISP3P54108 245 aa13.13□□□□□ -0.31
UPK3A-201ENST00000216211 DSTNP60981 165 aa13.13□□□□□ -0.31
UPK3A-201ENST00000216211 TGFBR3Q03167 851 aa13.13□□□□□ -0.31
UPK3A-201ENST00000216211 RAB35Q15286 201 aa13.13□□□□□ -0.31
UPK3A-201ENST00000216211 REP15Q6BDI9 236 aa13.13□□□□□ -0.31
UPK3A-201ENST00000216211 WBP2NLQ6ICG8 309 aa13.13□□□□□ -0.31
UPK3A-201ENST00000216211 BLOC1S3Q6QNY0 202 aa13.13□□□□□ -0.31
UPK3A-201ENST00000216211 AAED1Q7RTV5 226 aa13.13□□□□□ -0.31
UPK3A-201ENST00000216211 GPAT4Q86UL3 456 aa13.13□□□□□ -0.31
UPK3A-201ENST00000216211 CLIP4Q8N3C7 705 aa13.13□□□□□ -0.31
UPK3A-201ENST00000216211 C17orf78Q8N4C9 275 aa13.13□□□□□ -0.31
UPK3A-201ENST00000216211 ZIC4Q8N9L1 334 aa13.13□□□□□ -0.31
UPK3A-201ENST00000216211 C1orf162Q8NEQ5 155 aaPredicted RBP13.13□□□□□ -0.31
UPK3A-201ENST00000216211 OR9I1Q8NGQ6 314 aa13.13□□□□□ -0.31
UPK3A-201ENST00000216211 TMEM45BQ96B21 275 aa13.13□□□□□ -0.31
UPK3A-201ENST00000216211 AURKBQ96GD4 344 aaPredicted RBP13.13□□□□□ -0.31
UPK3A-201ENST00000216211 ZNF385AQ96PM9 386 aaKnown RBP13.13□□□□□ -0.31
UPK3A-201ENST00000216211 SLC52A3Q9NQ40 469 aa13.13□□□□□ -0.31
UPK3A-201ENST00000216211 CALML5Q9NZT1 146 aa13.13□□□□□ -0.31
UPK3A-201ENST00000216211 MXRA5Q9NR99 2828 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 A0A096LNT2 108 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 FAM234BA2RU67 622 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 TLX2O43763 284 aaPredicted RBP13.12□□□□□ -0.31
UPK3A-201ENST00000216211 CIB2O75838 187 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 ZCCHC18P0CG32 403 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 PRG2P13727 222 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 MPGP29372 298 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 COPZ1P61923 177 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 MMEL1Q495T6 779 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 HIKESHIQ53FT3 197 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 ZNF544Q6NX49 715 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 C8orf82Q6P1X6 216 aaPredicted RBP13.12□□□□□ -0.31
UPK3A-201ENST00000216211 CLEC2AQ6UVW9 174 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 CXXC5Q7LFL8 322 aaKnown RBP13.12□□□□□ -0.31
UPK3A-201ENST00000216211 ZNF525Q8N782 197 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 PCYOX1LQ8NBM8 494 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 OR10H5Q8NGA6 315 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 SLC38A5Q8WUX1 472 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 TMEM19Q96HH6 336 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 SF3B5Q9BWJ5 86 aaKnown RBP13.12□□□□□ -0.31
UPK3A-201ENST00000216211 TAPBPLQ9BX59 468 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 FKRPQ9H9S5 495 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 TPT1P8Q9HAU6 139 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 ADPRHL2Q9NX46 363 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 SLC7A8Q9UHI5 535 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 CHST2Q9Y4C5 530 aa13.12□□□□□ -0.31
UPK3A-201ENST00000216211 COL6A5A8TX70 2615 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 A8MVM7 634 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 ATP6V1G2-DDX39BF2Z307 99 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 MRASO14807 208 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 FRS3O43559 492 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 P2RY4P51582 365 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 POLR2JP52435 117 aaKnown RBP13.11□□□□□ -0.31
UPK3A-201ENST00000216211 LGALS3BPQ08380 585 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 LARS2Q15031 903 aaKnown RBP13.11□□□□□ -0.31
UPK3A-201ENST00000216211 SNCBQ16143 134 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 TRMT5Q32P41 509 aaKnown RBP13.11□□□□□ -0.31
UPK3A-201ENST00000216211 RNF220Q5VTB9 566 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 C1orf140Q5VVS0 124 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 TMEM225Q6GV28 225 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 HMBOX1Q6NT76 420 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 KLHL24Q6TFL4 600 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 SERPINA11Q86U17 422 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 POMGNT2Q8NAT1 580 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 VPS33AQ96AX1 596 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 C3orf49Q96BT1 292 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 SPDL1Q96EA4 605 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 ITCHQ96J02 903 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 CLPTM1LQ96KA5 538 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 RMND5AQ9H871 391 aa13.11□□□□□ -0.31
UPK3A-201ENST00000216211 ATRQ13535 2644 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 A0A0G2JPF8 293 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 HNRNPCL2B2RXH8 293 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 HNRNPCL3B7ZW38 293 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 H7C417 338 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 NR5A2O00482 541 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 KRT33AO76009 404 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 WNT11O96014 354 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 HNRNPCL4P0DMR1 293 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 APOBEC3AP31941 199 aaPredicted RBP13.1□□□□□ -0.31
UPK3A-201ENST00000216211 SELENOPP49908 381 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 DSCR9P59020 149 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 PRPS1P60891 318 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 PSME3P61289 254 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 C6orf10Q5SRN2 563 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 NIPAL3Q6P499 406 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 MSANTD1Q6ZTZ1 278 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 CREB3L2Q70SY1 520 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 ABHD12BQ7Z5M8 362 aaPredicted RBP13.1□□□□□ -0.31
UPK3A-201ENST00000216211 HIPK1Q86Z02 1210 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 SPATA9Q9BWV2 254 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 PIF1Q9H611 641 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 ZNF232Q9UNY5 417 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 MOKQ9UQ07 419 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 PCDHB14Q9Y5E9 798 aa13.1□□□□□ -0.31
UPK3A-201ENST00000216211 SVEP1Q4LDE5 3571 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 TMEM247A6NEH6 219 aa13.09□□□□□ -0.31
UPK3A-201ENST00000216211 A8MV72 311 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms