RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 KCNK15Q9H427 330 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 DNAJB12Q9NXW2 375 aaKnown RBP12.84□□□□□ -0.35
USH1C-201ENST00000005226 PILRAQ9UKJ1 303 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 DTX4Q9Y2E6 619 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 GON4LQ3T8J9 2241 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 SZT2Q5T011 3432 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 A0A1B0GUH1 482 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 CDC123O75794 336 aaPredicted RBP12.84□□□□□ -0.35
USH1C-201ENST00000005226 RASGRP1O95267 797 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 GPR75O95800 540 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 MAS1P04201 325 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 LPLP06858 475 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 CBFBQ13951 182 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 STPG2Q8N412 459 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 GATSQ8NAP1 163 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 OR10AC1Q8NH08 325 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 OR14A16Q8NHC5 309 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 RELTQ969Z4 430 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 S100A16Q96FQ6 103 aaKnown RBP12.84□□□□□ -0.35
USH1C-201ENST00000005226 RADILQ96JH8 1075 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 ULBP3Q9BZM4 244 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 RSPH9Q9H1X1 276 aaPredicted RBP12.84□□□□□ -0.35
USH1C-201ENST00000005226 KIR3DX1Q9H7L2 352 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 C12orf4Q9NQ89 552 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 ENTPD2Q9Y5L3 495 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 HEATR5AQ86XA9 2040 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 TMEM72A0PK05 275 aa12.83□□□□□ -0.35
USH1C-201ENST00000005226 PRSS38A1L453 326 aa12.83□□□□□ -0.35
USH1C-201ENST00000005226 GPR89AB7ZAQ6 455 aa12.83□□□□□ -0.35
USH1C-201ENST00000005226 H7C1C5 153 aa12.83□□□□□ -0.35
USH1C-201ENST00000005226 CBX7O95931 251 aa12.83□□□□□ -0.35
USH1C-201ENST00000005226 GPR89BP0CG08 455 aa12.83□□□□□ -0.35
USH1C-201ENST00000005226 ITPKBP27987 946 aa12.83□□□□□ -0.35
USH1C-201ENST00000005226 ACTR1BP42025 376 aa12.83□□□□□ -0.35
USH1C-201ENST00000005226 ACTR1AP61163 376 aa12.83□□□□□ -0.35
USH1C-201ENST00000005226 LCN6P62502 163 aa12.83□□□□□ -0.35
USH1C-201ENST00000005226 TMEM31Q5JXX7 168 aa12.83□□□□□ -0.35
USH1C-201ENST00000005226 ZNF761Q86XN6 746 aaPredicted RBP12.83□□□□□ -0.35
USH1C-201ENST00000005226 GRAMD2AQ8IUY3 354 aa12.83□□□□□ -0.35
USH1C-201ENST00000005226 FAM71CQ8NEG0 241 aa12.83□□□□□ -0.35
USH1C-201ENST00000005226 OR6M1Q8NGM8 313 aa12.83□□□□□ -0.35
USH1C-201ENST00000005226 ZDHHC1Q8WTX9 485 aa12.83□□□□□ -0.35
USH1C-201ENST00000005226 FAM3CQ92520 227 aa12.83□□□□□ -0.35
USH1C-201ENST00000005226 PMEPA1Q969W9 287 aa12.83□□□□□ -0.35
USH1C-201ENST00000005226 PAWRQ96IZ0 340 aaKnown RBP12.83□□□□□ -0.35
USH1C-201ENST00000005226 SRA1Q9HD15 236 aaKnown RBP12.83□□□□□ -0.35
USH1C-201ENST00000005226 ZNF281Q9Y2X9 895 aa12.83□□□□□ -0.35
USH1C-201ENST00000005226 ARHGEF17Q96PE2 2063 aaPredicted RBP12.83□□□□□ -0.35
USH1C-201ENST00000005226 ANKRD20A5PA0PJZ0 165 aa12.83□□□□□ -0.36
USH1C-201ENST00000005226 TVP23AA6NH52 213 aa12.83□□□□□ -0.36
USH1C-201ENST00000005226 BLOC1S5-TXNDC5H3BN57 136 aa12.83□□□□□ -0.36
USH1C-201ENST00000005226 CYR61O00622 381 aa12.83□□□□□ -0.36
USH1C-201ENST00000005226 RLN1P04808 185 aa12.83□□□□□ -0.36
USH1C-201ENST00000005226 FBXO45P0C2W1 286 aa12.83□□□□□ -0.36
USH1C-201ENST00000005226 TAS2R20P59543 309 aa12.83□□□□□ -0.36
USH1C-201ENST00000005226 RPS21P63220 83 aaKnown RBP12.83□□□□□ -0.36
USH1C-201ENST00000005226 PSG6Q00889 435 aa12.83□□□□□ -0.36
USH1C-201ENST00000005226 GUCA2AQ02747 115 aa12.83□□□□□ -0.36
USH1C-201ENST00000005226 HLXQ14774 488 aaPredicted RBP12.83□□□□□ -0.36
USH1C-201ENST00000005226 BAIAP2L2Q6UXY1 529 aa12.83□□□□□ -0.36
USH1C-201ENST00000005226 MAMSTRQ6ZN01 415 aa12.83□□□□□ -0.36
USH1C-201ENST00000005226 SGTBQ96EQ0 304 aa12.83□□□□□ -0.36
USH1C-201ENST00000005226 PLA2G2FQ9BZM2 168 aa12.83□□□□□ -0.36
USH1C-201ENST00000005226 PLEKHA1Q9HB21 404 aa12.83□□□□□ -0.36
USH1C-201ENST00000005226 CD93Q9NPY3 652 aa12.83□□□□□ -0.36
USH1C-201ENST00000005226 ING1Q9UK53 422 aaPredicted RBP12.83□□□□□ -0.36
USH1C-201ENST00000005226 SPEGQ15772 3267 aa12.83□□□□□ -0.36
USH1C-201ENST00000005226 EML5Q05BV3 1969 aa12.83□□□□□ -0.36
USH1C-201ENST00000005226 FXYD6-FXYD2A0A087WZ82 144 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 SMAD9O15198 467 aaKnown RBP12.82□□□□□ -0.36
USH1C-201ENST00000005226 SUSD5O60279 629 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 GPANK1O95872 356 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 IFNGR1P15260 489 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 CDKN2AP42771 156 aaKnown RBP12.82□□□□□ -0.36
USH1C-201ENST00000005226 H2BFSP57053 126 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 PPP1CAP62136 330 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 EXOSC6Q5RKV6 272 aaKnown RBP12.82□□□□□ -0.36
USH1C-201ENST00000005226 DCAF12L2Q5VW00 463 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 STAC2Q6ZMT1 411 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 SAMD14Q8IZD0 417 aaPredicted RBP12.82□□□□□ -0.36
USH1C-201ENST00000005226 OR6V1Q8N148 313 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 SPACA7Q96KW9 195 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 OR2M4Q96R27 311 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 GAL3ST1Q99999 423 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 ZNF426Q9BUY5 554 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 FXYD6Q9H0Q3 95 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 LRIT1Q9P2V4 623 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 BAIAP2Q9UQB8 552 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 TRAV8-7A0A075B6U6 113 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 OR2M5A3KFT3 312 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 CREBL2O60519 120 aaPredicted RBP12.82□□□□□ -0.36
USH1C-201ENST00000005226 RAD1O60671 282 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 ECDO95905 644 aaPredicted RBP12.82□□□□□ -0.36
USH1C-201ENST00000005226 NMBP08949 121 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 TYRP1P17643 537 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 MAP3K8P41279 467 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 HTRA3P83110 453 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 ERV3-1Q14264 604 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 DEFB110Q30KQ9 67 aa12.82□□□□□ -0.36
USH1C-201ENST00000005226 OR7E24Q6IFN5 339 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms