RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Prtn3Q61096 254 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Tlx2Q61663 284 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 H2-M10.3Q85ZW6 330 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Tm9sf4Q8BH24 643 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Lkaaear1Q8BIG2 198 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Cxcl16Q8BSU2 246 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Olfr283Q8VGU2 309 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Slc41a3Q921R8 488 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Ubqln4Q99NB8 596 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Cdc20Q9JJ66 499 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Slco1b2Q9JJL3 689 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Slc7a7Q9Z1K8 510 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Ier3P46694 153 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 BglapP86546 95 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Bglap2P86547 95 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 CltbQ6IRU5 229 aaKnown RBP19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Smarcd3Q6P9Z1 483 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Thnsl2Q80W22 483 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Luzp2Q8BGY3 345 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Glt28d2Q8BML3 165 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 ThtpaQ8JZL3 224 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Ergic3Q9CQE7 383 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Trim13Q9CYB0 407 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Cers5Q9D6K9 414 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 2200002D01RikQ9D809 114 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Tmem43Q9DBS1 400 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Rtp4Q9ER80 249 aaKnown RBP19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Olfr2Q9QWU6 327 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Gm20489A2AGH5 449 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Lcn11A2BHR2 178 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Mn1D3YWE6 1297 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Zfp28P10078 825 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 P18524 117 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Bbs1Q3V3N7 593 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Dcdc2Q5DU00 475 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Snta1Q61234 503 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Kmt5cQ6Q783 468 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Med19Q8C1S0 244 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Olfr51Q8VGG9 307 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Olfr683Q8VGV1 319 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Frs3Q91WJ0 492 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Q9CQF4 240 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Riok2Q9CQS5 547 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Pgm3Q9CYR6 542 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 NaaaQ9D7V9 362 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Cdc40Q9DC48 579 aaKnown RBP19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Ntn4Q9JI33 628 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Plod2Q9R0B9 737 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 RfxankQ9Z205 269 aa19.27■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Pcnx3Q8VI59 2028 aa19.27■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Ice1E9Q286 2241 aaKnown RBP19.26■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 BC035947B2RQY6 695 aa19.26■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Tmem229aB9EJI9 371 aa19.26■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Socs1O35716 212 aa19.26■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 OsmrO70458 971 aa19.26■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Emx1Q04742 257 aa19.26■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Gm45902Q3UDN3 361 aa19.26■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Dnaaf3Q3UYV8 586 aa19.26■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Slc35g3Q5F297 340 aa19.26■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Zrsr1Q64707 428 aa19.26■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Olfr1166Q7TR27 316 aa19.26■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Guf1Q8C3X4 651 aaKnown RBP19.26■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Faim2Q8K097 317 aa19.26■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Olfr658Q8VGV5 323 aa19.26■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Dnajb8Q9QYI7 227 aa19.26■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Rhox2cA2AWL9 191 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Emc8O70378 207 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Rpl6P47911 296 aaKnown RBP19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Tnfrsf26P83626 204 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Eml4Q3UMY5 988 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Mettl7a2Q5I0W6 244 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Surf4Q64310 269 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Opn5Q6VZZ7 377 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Olfr967Q7TRA6 310 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Tmem30bQ8BHG3 353 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Fbxl14Q8BID8 400 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Mettl6Q8BVH9 282 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Unc119bQ8C4B4 251 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Cnot2Q8C5L3 540 aaKnown RBP19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 LiphQ8CIV3 451 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Olfr1232Q8VEX7 311 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Asb16Q8VHS5 453 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Tssk6Q925K9 273 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 NubplQ9CWD8 319 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Ceacam20Q9D2Z1 577 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Vmn1r53Q9EP93 310 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Nrip3Q9JJR9 240 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Bco1Q9JJS6 566 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Tyk2Q9R117 1184 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Adam11Q9R1V4 773 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Pdlim3O70209 316 aaKnown RBP19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Mtnd1P03888 318 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Apex1P28352 317 aaKnown RBP19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Hoxd1Q01822 328 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 UbqlnlQ14DL0 610 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Mier2Q3U3N0 541 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Spag8Q3V0Q6 470 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Ddit4lQ8VHZ5 193 aa19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Atp5f1Q9CQQ7 256 aaKnown RBP19.25■□□□□ 0.67
Ccdc88a-202ENSMUST00000109477 Reg4Q9D8G5 157 aa19.25■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms