RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Sult2a8Q8BGL3 282 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Slc6a17Q8BJI1 727 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Abhd17cQ8VCV1 320 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Olfr1226Q8VGM5 310 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Ccdc167Q9D162 97 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Brix1Q9DCA5 353 aaKnown RBP10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Vmn1r53Q9EP93 310 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 NpvfQ9ESQ8 188 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 UxtQ9WTZ0 157 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Cited4Q9WUL8 182 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Kcnd3Q9Z0V1 655 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 RfxankQ9Z205 269 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Mllt6B1AR10 1109 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Plscr5J3QM92 274 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Il6P08505 211 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gsx2P31316 305 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Zic1P46684 447 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Pitx2P97474 317 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Camk2dQ6PHZ2 499 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 N6amt1Q6SKR2 214 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Olfr128Q7TRJ1 308 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 NraddQ8CJ26 228 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Casc3Q8K3W3 698 aaKnown RBP10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Asf1bQ9DAP7 202 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Ccnl2Q9JJA7 518 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 RlimQ9WTV7 600 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Dock6Q8VDR9 2080 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Igkv17-121A0A0G2JFA8 117 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Rnf165E9QAU8 347 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 P01851 173 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 P01852 173 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 NppaP05125 152 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 En2P09066 324 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Adamts8P57110 905 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Lhx1P63006 406 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Sohlh1Q6IUP1 357 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Olfr1349Q7TQV1 317 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Asb18Q8VHA6 467 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 B3galnt1Q920V1 331 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 HhatlQ9D1G3 503 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Tmem27Q9ESG4 222 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Cyp11a1Q9QZ82 526 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Cyp4a31F8WGU9 509 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Q3USZ8 430 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gm8332Q3UTA4 144 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Taar7aQ5QD12 358 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 CmahQ61419 577 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 CishQ62225 257 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Jazf1Q80ZQ5 243 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Nudt15Q8BG93 170 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Cldn17Q8BXA6 224 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 P2ry10bQ8BY68 352 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Sertm1Q8CD78 107 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Olfr353Q8VGK0 311 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Plpp7Q91WB2 271 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 AldobQ91Y97 364 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 AspnQ99MQ4 373 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Ate1Q9Z2A5 516 aa10.51□□□□□ -0.73
Topbp1-201ENSMUST00000035164 PhipQ8VDD9 1821 aaKnown RBP10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Trav1A0A075B5Z4 110 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Cyp4a30bA0A087WS15 508 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 SvaE9PX96 165 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Susd1E9Q3H4 752 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Lin7bO88951 207 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Sf3b6P59708 125 aaKnown RBP10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Pebp1P70296 187 aaKnown RBP10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Il12rb2P97378 874 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Masp1P98064 704 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Lgals3bpQ07797 577 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 B3gnt4Q1RLK6 350 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Nt5c3bQ3UFY7 300 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gm14851Q5ERJ0 116 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Bdkrb1Q61125 334 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Paqr9Q6TCG2 375 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Efcab7Q8VDY4 628 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Olfr1312Q8VF10 317 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Rpp25Q91WE3 199 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Rab28Q99KL7 221 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Dgat2Q9DCV3 388 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 RangrfQ9JIB0 185 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Tmem176bQ9R1Q6 263 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gstz1Q9WVL0 216 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Stk25Q9Z2W1 426 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Igkv5-39A0A0G2JDV4 115 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Zfp442A2AQA0 667 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gm3633L7N233 213 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Gm9611L7N476 213 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Dlx5P70396 289 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Snx33Q4VAA7 574 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Fzd8Q61091 685 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Ttf1Q62187 859 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Rcbtb1Q6NXM2 531 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Tas2r40Q7TQB8 319 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Olfr314Q7TRZ7 330 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Fbxl21Q8BFZ4 434 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Wdfy2Q8BUB4 400 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 GhitmQ91VC9 346 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Efcab11Q9D0E5 162 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Acad8Q9D7B6 413 aa10.5□□□□□ -0.73
Topbp1-201ENSMUST00000035164 Aldh7a1Q9DBF1 539 aa10.5□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms