RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Rassf1Q99MK9 340 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Arfgap1Q9EPJ9 414 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Qtrt1Q9JMA2 403 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Ppp1r17Q9Z2E4 159 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Olfr1164A2AVT5 326 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Ttll3A4Q9E5 927 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Gm3149E9PW52 257 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Zfp945E9PYM8 794 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Olfr655E9Q252 308 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Omt2aF6ZJR3 104 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Gm8362K7N6Y6 257 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Irs3O54718 495 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Spsb2O88838 264 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Nfkbil1O88995 381 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 DtymkP97930 212 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Rab42Q0PD08 215 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Trim45Q6PFY8 580 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Olfr1161Q7TR29 321 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 2810021J22RikQ8BIB6 539 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Lrfn5Q8BXA0 719 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 NdnfQ8C119 568 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Plekhn1Q8C886 359 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Med25Q8VCB2 745 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Gstk1Q9DCM2 226 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Nox4Q9JHI8 578 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Tmem176bQ9R1Q6 263 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Scnn1gQ9WU39 655 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Slc7a7Q9Z1K8 510 aa11.68□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Dock8Q8C147 2100 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Rasgef1aA0A0N4SVR5 498 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 FcmrA1KXC4 422 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Rgs5O08850 181 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Ly6aP05533 134 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Dpp4P28843 760 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 DbiP31786 87 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 P2ry2P35383 373 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 CpoxP36552 443 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Rln1P47932 185 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Actc1P68033 377 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Acta1P68134 377 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Olfr151Q60893 309 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 ParpbpQ6IRT3 573 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Chst9Q76EC5 413 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Gpatch2Q7TQC7 527 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Slc35d3Q8BGF8 422 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Tsen15Q8R3W5 168 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Adarb1Q91ZS8 711 aaKnown RBP11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 PinlypQ9CQD7 212 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Txndc17Q9CQM5 123 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Spaca7Q9D2S4 182 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Alg2Q9DBE8 415 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Dok3Q9QZK7 444 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Mbd4Q9Z2D7 554 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 DmdP11531 3678 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Gm13178B1AVU7 408 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 GlsD3Z7P3 674 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Gm20715E9Q3L7 95 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Prdm14E9Q3T6 561 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Opn1mwO35599 359 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Fcn2O70497 314 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Fgf3P05524 245 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Capza2P47754 286 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Rfx3P48381 749 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Eif4eP63073 217 aaKnown RBP11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Olfr270Q7TS19 314 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Zadh2Q8BGC4 377 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Emc1Q8C7X2 997 aaKnown RBP11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Swi5Q8K3D3 89 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Abhd14bQ8VCR7 210 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Olfr763Q8VGC1 309 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Ptp4a3Q9D658 173 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 PmpcaQ9DC61 524 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Tmem176aQ9DCS1 244 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Tlr1Q9EPQ1 795 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Wdr61Q9ERF3 305 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Xpr1Q9Z0U0 695 aa11.67□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Parp4E9PYK3 1969 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Gm29106A0A087WSP8 697 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 4932443I19RikA0A286YE38 169 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 TomtA1Y9I9 258 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Gm364A2AFI6 671 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Gm13078A2AGW8 474 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Olfr1314A2AVL6 312 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Fam170bE9PXT9 378 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Vmn2r101E9PZS9 857 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Adamts3E9Q287 1204 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Gm20518E9Q548 580 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 TP20293 436 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Dus4lQ32M08 324 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Pak6Q3ULB5 682 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Foxd3Q61060 465 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Fzd8Q61091 685 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Taf6Q62311 678 aaKnown RBP11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Rtp2Q80ZI2 223 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Tmem222Q8BVA2 208 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Q8C784 167 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Prmt3Q922H1 532 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Rbm18Q9CR83 190 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Mfsd2aQ9DA75 534 aa11.66□□□□□ -0.54
Rnf4-201ENSMUST00000030992 Trbc2A0A075B5J4 173 aa11.66□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms