RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 PAHP00439 452 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 EIF4EP06730 217 aaKnown RBP15.45■□□□□ 0.06
PHGDH-229ENST00000641891 GDI2P50395 445 aaKnown RBP15.45■□□□□ 0.06
PHGDH-229ENST00000641891 CTXN1P60606 82 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 LCN6P62502 163 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 LGALS3BPQ08380 585 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 CDK5R1Q15078 307 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 TRAM1Q15629 374 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 ALG10Q5BKT4 473 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 CCDC74AQ96AQ1 378 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 ELF4Q99607 663 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-229ENST00000641891 LPAR4Q99677 370 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 WWTR1Q9GZV5 400 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 ENAMQ9NRM1 1142 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 ATXN7L1Q9ULK2 861 aaPredicted RBP15.45■□□□□ 0.06
PHGDH-229ENST00000641891 UNC13CQ8NB66 2214 aa15.45■□□□□ 0.06
PHGDH-229ENST00000641891 IGHV3-20A0A0C4DH32 117 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 A0A0G2JMP0 313 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 A0A0X1KG70 313 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 OGG1O15527 345 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 SLC19A2O60779 497 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 CCNKO75909 580 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 ASAH2BP0C7U1 165 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 IMPDH2P12268 514 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 KIR2DL3P43628 341 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 RPS5P46782 204 aaKnown RBP15.44■□□□□ 0.06
PHGDH-229ENST00000641891 GBX2P52951 348 aaPredicted RBP15.44■□□□□ 0.06
PHGDH-229ENST00000641891 ACTA2P62736 377 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 ACTG2P63267 376 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 PLCXD2Q0VAA5 305 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 LINC01590Q5TEZ4 76 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 HLA-DQA1Q5Y7H0 255 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 TRIQKQ629K1 86 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 TSSK4Q6SA08 328 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 UTS2BQ765I0 119 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 ZNF511Q8NB15 262 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 OR4M2Q8NGB6 313 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 THAP4Q8WY91 577 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 TAAR8Q969N4 342 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 RELTQ969Z4 430 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 SMIM19Q96E16 107 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 PDCD1LG2Q9BQ51 273 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 LAT2Q9GZY6 243 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 SEMA5BQ9P283 1151 aa15.44■□□□□ 0.06
PHGDH-229ENST00000641891 MRTO4Q9UKD2 239 aaKnown RBP15.44■□□□□ 0.06
PHGDH-229ENST00000641891 SOX1O00570 391 aaPredicted RBP15.43■□□□□ 0.06
PHGDH-229ENST00000641891 TSPAN2O60636 221 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 CD14P08571 375 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 ITPKBP27987 946 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 UQCRC1P31930 480 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 SIRPAP78324 504 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 GPLD1P80108 840 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 RPL18Q07020 188 aaKnown RBP15.43■□□□□ 0.06
PHGDH-229ENST00000641891 KCNJ8Q15842 424 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 METAP1DQ6UB28 335 aaPredicted RBP15.43■□□□□ 0.06
PHGDH-229ENST00000641891 PRSS42Q7Z5A4 293 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 JAZF1Q86VZ6 243 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 CARFQ8N187 725 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 SYS1Q8N2H4 156 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 SAMD12Q8N8I0 201 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 OR4M1Q8NGD0 313 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 ACOT12Q8WYK0 555 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 OMA1Q96E52 524 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 CCNL2Q96S94 520 aaPredicted RBP15.43■□□□□ 0.06
PHGDH-229ENST00000641891 ALG12Q9BV10 488 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 RP1P56715 2156 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 TMEM265A0A087WTH1 108 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 MEIOCA2RUB1 952 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 A8MV72 311 aaPredicted RBP15.43■□□□□ 0.06
PHGDH-229ENST00000641891 B4DXG7 233 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 IDH3BO43837 385 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 HLA-DQB1P01920 261 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 EDNRAP25101 427 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 CXCL12P48061 93 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 RPS11P62280 158 aaKnown RBP eCLIP15.43■□□□□ 0.06
PHGDH-229ENST00000641891 ISXQ2M1V0 245 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 SLC35D3Q5M8T2 416 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 C1QL3Q5VWW1 255 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 COX15Q7KZN9 410 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 C19orf18Q8NEA5 215 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 OR1N1Q8NGS0 311 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 LIPHQ8WWY8 451 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 DAZLQ92904 295 aaKnown RBP15.43■□□□□ 0.06
PHGDH-229ENST00000641891 CLDN23Q96B33 292 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 ADAM19Q9H013 955 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 DUSP15Q9H1R2 295 aaPredicted RBP15.43■□□□□ 0.06
PHGDH-229ENST00000641891 SLC22A11Q9NSA0 550 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 ADAM30Q9UKF2 790 aa15.43■□□□□ 0.06
PHGDH-229ENST00000641891 PAIP2BQ9ULR5 123 aaKnown RBP15.43■□□□□ 0.06
PHGDH-229ENST00000641891 A0A087WV48 116 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 A0A0B4J203 849 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 TRBV2A0A0J9YWF9 115 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 DCTN6O00399 190 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 NDUFB5O43674 189 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 SCO2O43819 266 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 CPNE3O75131 537 aaKnown RBP15.42■□□□□ 0.06
PHGDH-229ENST00000641891 GLCEO94923 617 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 ABCD3P28288 659 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 NR4A2P43354 598 aa15.42■□□□□ 0.06
PHGDH-229ENST00000641891 WDR45BQ5MNZ6 344 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms