RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 POMGNT2Q8NAT1 580 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 PLPP5Q8NEB5 264 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 ELOA3Q8NG57 546 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 PMEPA1Q969W9 287 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 ZMYND19Q96E35 227 aaPredicted RBP13.75□□□□□ -0.21
TRIM3-215ENST00000639856 LCORQ96JN0 433 aaPredicted RBP13.75□□□□□ -0.21
TRIM3-215ENST00000639856 NEDD4LQ96PU5 975 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 PPP1R3EQ9H7J1 279 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 GRIP1Q9Y3R0 1128 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 RALGAPA1Q6GYQ0 2036 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 ZNF264O43296 627 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 OIP5O43482 229 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 UTS2O95399 124 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 TFP02787 698 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 OR2T7P0C7T2 308 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 PYCR1P32322 319 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 PRPS1P60891 318 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 SLC3A1Q07837 685 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 ISXQ2M1V0 245 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 FAM69BQ5VUD6 431 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 DMKNQ6E0U4 476 aaPredicted RBP13.75□□□□□ -0.21
TRIM3-215ENST00000639856 CBLN3Q6UW01 205 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 APOOLQ6UXV4 268 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 ATG4DQ86TL0 474 aaPredicted RBP13.75□□□□□ -0.21
TRIM3-215ENST00000639856 NR2C2APQ86WQ0 139 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 NPEPL1Q8NDH3 523 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 C17orf47Q8NEP4 570 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 OR1N1Q8NGS0 311 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 OR2T27Q8NH04 317 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 ACOT12Q8WYK0 555 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 PGLYRP3Q96LB9 341 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 DDOQ99489 341 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 TMEM43Q9BTV4 400 aa13.75□□□□□ -0.21
TRIM3-215ENST00000639856 PPIL3Q9H2H8 161 aaKnown RBP13.75□□□□□ -0.21
TRIM3-215ENST00000639856 MRTO4Q9UKD2 239 aaKnown RBP13.75□□□□□ -0.21
TRIM3-215ENST00000639856 CACNA1HO95180 2353 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 LINC00854A0A1B0GVQ3 168 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 KHNYNO15037 678 aaKnown RBP13.74□□□□□ -0.21
TRIM3-215ENST00000639856 IDH3BO43837 385 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 SC5DO75845 299 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 IMPDH2P12268 514 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 CCL4P13236 92 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 ZNF28P17035 718 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 PTBP1P26599 531 aaKnown RBP eCLIP13.74□□□□□ -0.21
TRIM3-215ENST00000639856 SHC1P29353 583 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 CASP3P42574 277 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 CCR4P51679 360 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 NR0B1P51843 470 aaKnown RBP13.74□□□□□ -0.21
TRIM3-215ENST00000639856 LGALS3BPQ08380 585 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 PON3Q15166 354 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 GXYLT1Q4G148 440 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 LCN1P1Q5VSP4 162 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 AGAP6Q5VW22 663 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 RPTNQ6XPR3 784 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 RFLNBQ8N5W9 214 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 BMPERQ8N8U9 685 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 OR5J2Q8NH18 312 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 ABHD4Q8TB40 342 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 AGAP4Q96P64 663 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 GPX7Q96SL4 187 aaPredicted RBP13.74□□□□□ -0.21
TRIM3-215ENST00000639856 ADOQ96SZ5 270 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 NMNAT3Q96T66 252 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 CNN2Q99439 309 aaKnown RBP13.74□□□□□ -0.21
TRIM3-215ENST00000639856 WWTR1Q9GZV5 400 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 MARCH7Q9H992 704 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 COPS7AQ9UBW8 275 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 PCDHGB7Q9Y5F8 929 aa13.74□□□□□ -0.21
TRIM3-215ENST00000639856 LDOC1O95751 146 aaPredicted RBP13.73□□□□□ -0.21
TRIM3-215ENST00000639856 HEXBP07686 556 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 APEX1P27695 318 aaKnown RBP13.73□□□□□ -0.21
TRIM3-215ENST00000639856 GRK6P43250 576 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 HCCSP53701 268 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 NRG3P56975 720 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 OR2B6P58173 313 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 ACTA2P62736 377 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 ACTG2P63267 376 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 ZFP36L1Q07352 338 aaKnown RBP13.73□□□□□ -0.21
TRIM3-215ENST00000639856 HBMQ6B0K9 141 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 ANKRD37Q7Z713 158 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 OR51L1Q8NGJ5 315 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 LIPHQ8WWY8 451 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 SLC22A4Q9H015 551 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 ADAM30Q9UKF2 790 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 COL27A1Q8IZC6 1860 aaPredicted RBP13.73□□□□□ -0.21
TRIM3-215ENST00000639856 SLC19A2O60779 497 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 MST1P26927 711 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 ACVR1BP36896 505 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 DIO1P49895 249 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 MADCAM1Q13477 382 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 RIN1Q13671 783 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 P2RY14Q15391 338 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 ZNF74Q16587 644 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 SLC35D3Q5M8T2 416 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 FAM27D1Q5T7N8 215 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 ZNF517Q6ZMY9 492 aaPredicted RBP13.73□□□□□ -0.21
TRIM3-215ENST00000639856 OVCH1Q7RTY7 1134 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 CEACAM19Q7Z692 300 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 PXKQ7Z7A4 578 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 TPRA1Q86W33 373 aa13.73□□□□□ -0.21
TRIM3-215ENST00000639856 UBQLNLQ8IYU4 475 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms