RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	RLIM	Q9NVW2	624 aa		12.84	□□□□□ -0.35
TARDBP-231	ENST00000639599	TMEM160	Q9NX00	188 aa		12.84	□□□□□ -0.35
TARDBP-231	ENST00000639599	FBXO9	Q9UK97	447 aa	Predicted RBP	12.84	□□□□□ -0.35
TARDBP-231	ENST00000639599	IFT52	Q9Y366	437 aa		12.84	□□□□□ -0.35
TARDBP-231	ENST00000639599	FRS3	O43559	492 aa		12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	AKAP8	O43823	692 aa	Known RBP	12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	ETFA	P13804	333 aa		12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	ZNF43	P17038	809 aa		12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	SRD5A1	P18405	259 aa		12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	SERPINF1	P36955	418 aa		12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	CAPZA2	P47755	286 aa		12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	SH3BGR	P55822	239 aa	Predicted RBP	12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	SLC25A3	Q00325	362 aa		12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	PLAUR	Q03405	335 aa		12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	C1D	Q13901	141 aa	Known RBP	12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	PHC2	Q8IXK0	858 aa		12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	ZNF540	Q8NDQ6	660 aa		12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	ZNF317	Q96PQ6	595 aa	Predicted RBP	12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	ADAM19	Q9H013	955 aa		12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	RAB1B	Q9H0U4	201 aa		12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	RAD21L1	Q9H4I0	556 aa		12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	WDR55	Q9H6Y2	383 aa	Predicted RBP	12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	CA10	Q9NS85	328 aa		12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	THAP1	Q9NVV9	213 aa		12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	NKIRAS1	Q9NYS0	192 aa		12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599	SELENON	Q9NZV5	590 aa		12.83	□□□□□ -0.36
TARDBP-231	ENST00000639599		A0A096LPE4	126 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599		A0A0G2JPF8	293 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	LOC100289279	A0A1B0GTE1	492 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599		A0A1W2PPZ6	126 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	HNRNPCL2	B2RXH8	293 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	HNRNPCL3	B7ZW38	293 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599		B9A039	149 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	HNRNPCL1	O60812	293 aa	Known RBP	12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	TFPT	P0C1Z6	253 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	HNRNPCL4	P0DMR1	293 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	IGHV4-31	P0DP07	118 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	IL12A	P29459	219 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	SELENOP	P49908	381 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	NCALD	P61601	193 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	PDCD4	Q53EL6	469 aa	Known RBP	12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	ZNF311	Q5JNZ3	666 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	RNF220	Q5VTB9	566 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	GPR137C	Q8N3F9	429 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	OR4F15	Q8NGB8	312 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	RNF217	Q8TC41	542 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	STK35	Q8TDR2	534 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	ZBTB9	Q96C00	473 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	TMEM19	Q96HH6	336 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	SPATA9	Q9BWV2	254 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	TPT1P8	Q9HAU6	139 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	DYNLRB1	Q9NP97	96 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	GPR45	Q9Y5Y3	372 aa		12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599	CHD3	Q12873	2000 aa	Known RBP	12.82	□□□□□ -0.36
TARDBP-231	ENST00000639599		A0A096LNT2	108 aa		12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	IGHV1-18	A0A0C4DH31	117 aa		12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	LOC390937	A0A1W2PQ73	354 aa		12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	UBD	O15205	165 aa		12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	SLC43A1	O75387	559 aa		12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	PDE5A	O76074	875 aa		12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	LY6H	O94772	140 aa		12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	C1QC	P02747	245 aa		12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	CLDN17	P56750	224 aa		12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	STX1B	P61266	288 aa		12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	ROR2	Q01974	943 aa	Known RBP	12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	ANKRD16	Q6P6B7	361 aa		12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	MSANTD1	Q6ZTZ1	278 aa		12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	CREB3L2	Q70SY1	520 aa		12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	ZIC4	Q8N9L1	334 aa		12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	SLC38A5	Q8WUX1	472 aa		12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	SORCS2	Q96PQ0	1159 aa		12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	ZIM2	Q9NZV7	527 aa		12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	SLC13A4	Q9UKG4	626 aa		12.81	□□□□□ -0.36
TARDBP-231	ENST00000639599	TLN2	Q9Y4G6	2542 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	AIM2	O14862	343 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	OR4A8	P0C604	315 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	ZCCHC18	P0CG32	403 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	HOXB1	P14653	301 aa	Predicted RBP	12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	NR4A2	P43354	598 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	RPS5	P46782	204 aa	Known RBP	12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	POLR2J	P52435	117 aa	Known RBP	12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	TUBA1B	P68363	451 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	TUBA4A	P68366	448 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	NAAA	Q02083	359 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	NPRL3	Q12980	569 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	TUBA1A	Q71U36	451 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	SERPINA11	Q86U17	422 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	MIER2	Q8N344	545 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	ANKS4B	Q8N8V4	417 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	MFSD8	Q8NHS3	518 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	BBS10	Q8TAM1	723 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	NANOS1	Q8WY41	292 aa	Known RBP	12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	ANKRD27	Q96NW4	1050 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	PARD6B	Q9BYG5	372 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	LINC00470	Q9BZP3	86 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	RCE1	Q9Y256	329 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	DSPP	Q9NZW4	1301 aa		12.8	□□□□□ -0.36
TARDBP-231	ENST00000639599	ARPC4-TTLL3	A0A0A6YYG9	625 aa		12.79	□□□□□ -0.36
TARDBP-231	ENST00000639599	TMEM120B	A0PK00	339 aa		12.79	□□□□□ -0.36

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