RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 BAHD1Q8TBE0 780 aaPredicted RBP18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 TSACCQ96A04 125 aaPredicted RBP18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 MRPL15Q9P015 296 aaKnown RBP18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 MAB21L2Q9Y586 359 aa18.44■□□□□ 0.54
SYNGAP1-227ENST00000638142 SDHBP21912 280 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 VEGFCP49767 419 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 BLVRAP53004 296 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 RPL6Q02878 288 aaKnown RBP18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 RNF44Q7L0R7 432 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 OR6V1Q8N148 313 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 ZNRF4Q8WWF5 429 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 BADQ92934 168 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 NMNAT3Q96T66 252 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 DDOQ99489 341 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 GSX2Q9BZM3 304 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 NMNAT2Q9BZQ4 307 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 LMAN2LQ9H0V9 348 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 POT1Q9NUX5 634 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 C2orf42Q9NWW7 574 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 ZNF224Q9NZL3 707 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 FLVCR2Q9UPI3 526 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 COL4A2P08572 1712 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 OR10H2O60403 315 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 IGKV1D-16P01601 117 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 IL10RAQ13651 578 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 ZNF141Q15928 474 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 SLC35F3Q8IY50 421 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 FTMTQ8N4E7 242 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 CEP76Q8TAP6 659 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 FCAMRQ8WWV6 532 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 NPDC1Q9NQX5 325 aaPredicted RBP18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 V9GY05 133 aa18.43■□□□□ 0.54
SYNGAP1-227ENST00000638142 ACOD1A6NK06 481 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 BET1O15155 118 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 CFDP00746 253 aaPredicted RBP18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 RAB40ALP0C0E4 278 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 C4BPBP20851 252 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 TNFRSF4P43489 277 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 RAB38P57729 211 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 BAMBIQ13145 260 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 ZNF267Q14586 743 aaPredicted RBP18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 ITPRIPL2Q3MIP1 535 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 TMEM255AQ5JRV8 349 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 DGAT2L6Q6ZPD8 337 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 Q6ZTK2 550 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 FCRLAQ7L513 359 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 UXS1Q8NBZ7 420 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 C7orf57Q8NEG2 295 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 OR6K6Q8NGW6 343 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 RAB40AQ8WXH6 277 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 S100A16Q96FQ6 103 aaKnown RBP18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 SLC25A18Q9H1K4 315 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 OR10A4Q9H209 315 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 K7EQS6 105 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 M0R233 179 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 GNB5O14775 395 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 APBB3O95704 486 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 PVRP15151 417 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 OLFML2AQ68BL7 652 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 GPAT4Q86UL3 456 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 CSNK1A1LQ8N752 337 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 ZNF433Q8N7K0 673 aaPredicted RBP18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 LIN7BQ9HAP6 207 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 FBXL3Q9UKT7 428 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 ZNF337Q9Y3M9 751 aa18.42■□□□□ 0.54
SYNGAP1-227ENST00000638142 A0A087WUJ7 227 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 OR6C68A6NDL8 312 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 C2orf74A8MZ97 194 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 H0Y8X5 98 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 KHDRBS3O75525 346 aaKnown RBP18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 RASGRP1O95267 797 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 CALCBP10092 127 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 CPN1P15169 458 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 S1PR1P21453 382 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 LSSP48449 732 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 PTH2RP49190 550 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 STX4Q12846 297 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 SPICQ8N5J4 248 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 OR4N2Q8NGD1 307 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 GCDHQ92947 438 aaPredicted RBP18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 ORAI1Q96D31 301 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 ANKRD20A5PA0PJZ0 165 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 EFCAB7A8K855 629 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 TOXO94900 526 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 GLCEO94923 617 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 IFNA16P05015 189 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 NTSR1P30989 418 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 PTGS2P35354 604 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 FAM53BQ14153 422 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 TMEM196Q5HYL7 178 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 PXDC1Q5TGL8 231 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 SLC6A19Q695T7 634 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 APOOLQ6UXV4 268 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 GALNT11Q8NCW6 608 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 C15orf40Q8WUR7 153 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 FOXJ3Q9UPW0 622 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 CA5BQ9Y2D0 317 aa18.41■□□□□ 0.54
SYNGAP1-227ENST00000638142 A0A1W2PPL8 197 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms