RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 PBX1P40424 430 aa18.12■□□□□ 0.49
CACNA1A-257ENST00000638009 ADAM5Q6NVV9 412 aa18.12■□□□□ 0.49
CACNA1A-257ENST00000638009 SLC35B2Q8TB61 432 aa18.12■□□□□ 0.49
CACNA1A-257ENST00000638009 SUSD3Q96L08 255 aa18.12■□□□□ 0.49
CACNA1A-257ENST00000638009 SHARPINQ9H0F6 387 aa18.12■□□□□ 0.49
CACNA1A-257ENST00000638009 OR51I2Q9H344 312 aa18.12■□□□□ 0.49
CACNA1A-257ENST00000638009 UCK1Q9HA47 277 aa18.12■□□□□ 0.49
CACNA1A-257ENST00000638009 Q6ZVU0 165 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 KCNJ15Q99712 375 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 SLC6A20Q9NP91 592 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 RBPMSQ93062 196 aaKnown RBP18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 CREBZFQ9NS37 354 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 NOCTQ9UK39 431 aaKnown RBP18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 RGPD8O14715 1765 aaPredicted RBP18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 RPS24P62847 133 aaKnown RBP18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 SELENOWP63302 87 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 WBP2NLQ6ICG8 309 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 CABLES2Q9BTV7 478 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 RBFOX1Q9NWB1 397 aaKnown RBP18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 URGCP-MRPS24S4R325 110 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 PCNX1Q96RV3 2341 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 NTF3P20783 257 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 DUSP1P28562 367 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 NRMQ8IXM6 262 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 ZDHHC18Q9NUE0 388 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 POLR2CP19387 275 aaPredicted RBP18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 M6PRP20645 277 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 DGKZQ13574 1117 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 VEZF1Q14119 521 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 RETREG3Q86VR2 466 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 SLC5A8Q8N695 610 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 BOKQ9UMX3 212 aaPredicted RBP18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 XRN1Q8IZH2 1706 aaKnown RBP18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 SORBS2O94875 1100 aaKnown RBP18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 INTS5Q6P9B9 1019 aaKnown RBP18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 ZFP41Q8N8Y5 198 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 OR4K5Q8NGD3 323 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 TMEM175Q9BSA9 504 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 C20orf85Q9H1P6 137 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 GPR52Q9Y2T5 361 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 LRRC3CA6NJW4 275 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 ZNF732B4DXR9 585 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 ACSM4P0C7M7 580 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 H3F3CQ6NXT2 135 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 CDC20BQ86Y33 519 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 AKT1S1Q96B36 256 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 RANGRFQ9HD47 186 aaPredicted RBP18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 OLAHQ9NV23 265 aa18.11■□□□□ 0.49
CACNA1A-257ENST00000638009 SLC9B1P1A6NJY1 282 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 UBL3O95164 117 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 RABIFP47224 123 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 SLC7A5P1Q8MH63 180 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 OR10J5Q8NHC4 309 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 CREB3L4Q8TEY5 395 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 WDR92Q96MX6 357 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 KCNA7Q96RP8 456 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 C1QTNF2Q9BXJ5 285 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 GPR34Q9UPC5 381 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 SDK2Q58EX2 2172 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 M0R143 59 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 PTBP1P26599 531 aaKnown RBP eCLIP18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 ADPRHP54922 357 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 ID2Q02363 134 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 SLC36A2Q495M3 483 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 GATSQ8NAP1 163 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 NUDT22Q9BRQ3 303 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 ELOVL3Q9HB03 270 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 TARBP1Q13395 1621 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 GRM2Q14416 872 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 MS4A13Q5J8X5 152 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 H2BFWTQ7Z2G1 175 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 GOLGA2P5Q9HBQ8 144 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 STRAPQ9Y3F4 350 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 RNASET2O00584 256 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 FRMPD2BQ6IN97 320 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 PPP1R3BQ86XI6 285 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 HEYLQ9NQ87 328 aaPredicted RBP18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 INTS6Q9UL03 887 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 TMEM11P17152 192 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 PSMB1P20618 241 aaKnown RBP18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 NCBP2-AS2Q69YL0 99 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 VWA1Q6PCB0 445 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 RABEPKQ7Z6M1 372 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 DTX3Q8N9I9 347 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 RASD2Q96D21 266 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 RNF19AQ9NV58 838 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 ATRNL1Q5VV63 1379 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 MTHFD2P13995 350 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 HLA-FP30511 346 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 MTURNQ8N3F0 131 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 LYSMD1Q96S90 227 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 CTXN2P0C2S0 81 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 ETV4P43268 484 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 CPNE8Q86YQ8 564 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 SLC6A18Q96N87 628 aa18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.1■□□□□ 0.49
CACNA1A-257ENST00000638009 BET1O15155 118 aa18.09■□□□□ 0.49
CACNA1A-257ENST00000638009 PTNP21246 168 aa18.09■□□□□ 0.49
CACNA1A-257ENST00000638009 MTCP1P56278 107 aa18.09■□□□□ 0.49
CACNA1A-257ENST00000638009 ARG2P78540 354 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms