RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 SWI5Q1ZZU3 235 aa16.12■□□□□ 0.17
CLN6-220ENST00000637450 MST1LQ2TV78 715 aa16.12■□□□□ 0.17
CLN6-220ENST00000637450 GTDC1Q4AE62 458 aa16.12■□□□□ 0.17
CLN6-220ENST00000637450 RPS26P11Q5JNZ5 115 aaPredicted RBP16.12■□□□□ 0.17
CLN6-220ENST00000637450 KLHL24Q6TFL4 600 aa16.12■□□□□ 0.17
CLN6-220ENST00000637450 EPHX4Q8IUS5 362 aa16.12■□□□□ 0.17
CLN6-220ENST00000637450 MGARPQ8TDB4 240 aa16.12■□□□□ 0.17
CLN6-220ENST00000637450 STK35Q8TDR2 534 aa16.12■□□□□ 0.17
CLN6-220ENST00000637450 C10orf105Q8TEF2 133 aa16.12■□□□□ 0.17
CLN6-220ENST00000637450 NANOS1Q8WY41 292 aaKnown RBP16.12■□□□□ 0.17
CLN6-220ENST00000637450 PROX1Q92786 737 aa16.12■□□□□ 0.17
CLN6-220ENST00000637450 C3orf49Q96BT1 292 aa16.12■□□□□ 0.17
CLN6-220ENST00000637450 TMEM19Q96HH6 336 aa16.12■□□□□ 0.17
CLN6-220ENST00000637450 ITCHQ96J02 903 aa16.12■□□□□ 0.17
CLN6-220ENST00000637450 SPATA9Q9BWV2 254 aa16.12■□□□□ 0.17
CLN6-220ENST00000637450 TMEM229AB2RXF0 380 aa16.11■□□□□ 0.17
CLN6-220ENST00000637450 KRT33AO76009 404 aa16.11■□□□□ 0.17
CLN6-220ENST00000637450 NCF2P19878 526 aaPredicted RBP16.11■□□□□ 0.17
CLN6-220ENST00000637450 SELENOPP49908 381 aa16.11■□□□□ 0.17
CLN6-220ENST00000637450 LGALS3BPQ08380 585 aa16.11■□□□□ 0.17
CLN6-220ENST00000637450 TBRG1Q3YBR2 411 aa16.11■□□□□ 0.17
CLN6-220ENST00000637450 MAVSQ7Z434 540 aa16.11■□□□□ 0.17
CLN6-220ENST00000637450 SERPINA11Q86U17 422 aa16.11■□□□□ 0.17
CLN6-220ENST00000637450 OR1K1Q8NGR3 316 aa16.11■□□□□ 0.17
CLN6-220ENST00000637450 VPS33AQ96AX1 596 aa16.11■□□□□ 0.17
CLN6-220ENST00000637450 ARMC7Q9H6L4 198 aa16.11■□□□□ 0.17
CLN6-220ENST00000637450 MANSC1Q9H8J5 431 aa16.11■□□□□ 0.17
CLN6-220ENST00000637450 RASD1Q9Y272 281 aa16.11■□□□□ 0.17
CLN6-220ENST00000637450 IFT52Q9Y366 437 aa16.11■□□□□ 0.17
CLN6-220ENST00000637450 HEATR1Q9H583 2144 aaKnown RBP16.1■□□□□ 0.17
CLN6-220ENST00000637450 IGHV1-18A0A0C4DH31 117 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 TMEM247A6NEH6 219 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 OR6C65A6NJZ3 312 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 FTCDNL1E5RQL4 147 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 ZNF587BE7ETH6 402 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 UBDO15205 165 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 LGI1O95970 557 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 CSF3P09919 207 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 PAX7P23759 505 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 POLR2JP52435 117 aaKnown RBP16.1■□□□□ 0.17
CLN6-220ENST00000637450 LINGO2Q7L985 606 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 OR9I1Q8NGQ6 314 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 MFSD8Q8NHS3 518 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 GTF2H4Q92759 462 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 BCL2L2Q92843 193 aaPredicted RBP16.1■□□□□ 0.17
CLN6-220ENST00000637450 FBXO17Q96EF6 278 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 SLC38A2Q96QD8 506 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 OR52B2Q96RD2 323 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 BCL2L10Q9HD36 194 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 TMEM160Q9NX00 188 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 PCDHB14Q9Y5E9 798 aa16.1■□□□□ 0.17
CLN6-220ENST00000637450 UPK3AO75631 287 aa16.09■□□□□ 0.17
CLN6-220ENST00000637450 LY6HO94772 140 aa16.09■□□□□ 0.17
CLN6-220ENST00000637450 NUDT7P0C024 238 aa16.09■□□□□ 0.17
CLN6-220ENST00000637450 HOXC5Q00444 222 aa16.09■□□□□ 0.17
CLN6-220ENST00000637450 EGR4Q05215 589 aa16.09■□□□□ 0.17
CLN6-220ENST00000637450 RGNQ15493 299 aa16.09■□□□□ 0.17
CLN6-220ENST00000637450 ZNF311Q5JNZ3 666 aa16.09■□□□□ 0.17
CLN6-220ENST00000637450 C6orf10Q5SRN2 563 aa16.09■□□□□ 0.17
CLN6-220ENST00000637450 PRAMEF8Q5VWM4 474 aa16.09■□□□□ 0.17
CLN6-220ENST00000637450 PRAMEF7Q5VXH5 474 aa16.09■□□□□ 0.17
CLN6-220ENST00000637450 CYB5R2Q6BCY4 276 aa16.09■□□□□ 0.17
CLN6-220ENST00000637450 NIPAL3Q6P499 406 aa16.09■□□□□ 0.17
CLN6-220ENST00000637450 ANKRD16Q6P6B7 361 aa16.09■□□□□ 0.17
CLN6-220ENST00000637450 MAGEE2Q8TD90 523 aaPredicted RBP16.09■□□□□ 0.17
CLN6-220ENST00000637450 SLC35B4Q969S0 331 aa16.09■□□□□ 0.17
CLN6-220ENST00000637450 ZNF317Q96PQ6 595 aaPredicted RBP16.09■□□□□ 0.17
CLN6-220ENST00000637450 KCNK17Q96T54 332 aa16.09■□□□□ 0.17
CLN6-220ENST00000637450 PTDSS2Q9BVG9 487 aa16.09■□□□□ 0.17
CLN6-220ENST00000637450 LINC00470Q9BZP3 86 aa16.09■□□□□ 0.17
CLN6-220ENST00000637450 CACYBPQ9HB71 228 aaKnown RBP16.09■□□□□ 0.17
CLN6-220ENST00000637450 CRNNQ9UBG3 495 aaPredicted RBP16.09■□□□□ 0.17
CLN6-220ENST00000637450 CDC42EP3Q9UKI2 254 aa16.09■□□□□ 0.17
CLN6-220ENST00000637450 ARPC4-TTLL3A0A0A6YYG9 625 aa16.08■□□□□ 0.16
CLN6-220ENST00000637450 RNF212BA8MTL3 300 aa16.08■□□□□ 0.16
CLN6-220ENST00000637450 AHSA1O95433 338 aa16.08■□□□□ 0.16
CLN6-220ENST00000637450 FAM157CP0CG43 387 aa16.08■□□□□ 0.16
CLN6-220ENST00000637450 HOXB1P14653 301 aaPredicted RBP16.08■□□□□ 0.16
CLN6-220ENST00000637450 USF1P22415 310 aaPredicted RBP16.08■□□□□ 0.16
CLN6-220ENST00000637450 MIER2Q8N344 545 aa16.08■□□□□ 0.16
CLN6-220ENST00000637450 KDM8Q8N371 416 aa16.08■□□□□ 0.16
CLN6-220ENST00000637450 SLC25A36Q96CQ1 311 aa16.08■□□□□ 0.16
CLN6-220ENST00000637450 ALKBH3Q96Q83 286 aaPredicted RBP16.08■□□□□ 0.16
CLN6-220ENST00000637450 KATNB1Q9BVA0 655 aa16.08■□□□□ 0.16
CLN6-220ENST00000637450 PAIP1Q9H074 479 aaKnown RBP16.08■□□□□ 0.16
CLN6-220ENST00000637450 A4GALTQ9NPC4 353 aa16.08■□□□□ 0.16
CLN6-220ENST00000637450 NKIRAS1Q9NYS0 192 aa16.08■□□□□ 0.16
CLN6-220ENST00000637450 VWC2LB2RUY7 222 aa16.07■□□□□ 0.16
CLN6-220ENST00000637450 CLIC1O00299 241 aa16.07■□□□□ 0.16
CLN6-220ENST00000637450 NR5A2O00482 541 aa16.07■□□□□ 0.16
CLN6-220ENST00000637450 ZNF432O94892 652 aa16.07■□□□□ 0.16
CLN6-220ENST00000637450 CRYAAP02489 173 aa16.07■□□□□ 0.16
CLN6-220ENST00000637450 IGHV4-31P0DP07 118 aa16.07■□□□□ 0.16
CLN6-220ENST00000637450 PNMTP11086 282 aa16.07■□□□□ 0.16
CLN6-220ENST00000637450 BMP2P12643 396 aa16.07■□□□□ 0.16
CLN6-220ENST00000637450 SERPINF1P36955 418 aa16.07■□□□□ 0.16
CLN6-220ENST00000637450 RPS5P46782 204 aaKnown RBP16.07■□□□□ 0.16
CLN6-220ENST00000637450 UBE2NP61088 152 aaKnown RBP16.07■□□□□ 0.16
CLN6-220ENST00000637450 MAGOHP61326 146 aaKnown RBP16.07■□□□□ 0.16
CLN6-220ENST00000637450 LSM11P83369 360 aaKnown RBP eCLIP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms