RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 TEX261Q6UWH6 196 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 KIAA1324Q6UXG2 1013 aaKnown RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 TRILQ7L0X0 811 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 HIST3H2AQ7L7L0 130 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 MEX3DQ86XN8 651 aaKnown RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 SLC35F3Q8IY50 421 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 OR2L13Q8N349 312 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 FTMTQ8N4E7 242 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 SIRT6Q8N6T7 355 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF565Q8N9K5 539 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 FAM71CQ8NEG0 241 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF680Q8NEM1 530 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 SLC22A8Q8TCC7 542 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 GRHL3Q8TE85 626 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 SSC4DQ8WTU2 575 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 GHSRQ92847 366 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 HIST1H2ACQ93077 130 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 SMIM19Q96E16 107 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 HSPA12BQ96MM6 686 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 SDF2Q99470 211 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 GPA33Q99795 319 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 GSDMCQ9BYG8 508 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF436Q9C0F3 470 aaPredicted RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF350Q9GZX5 532 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 QRSL1Q9H0R6 528 aaKnown RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 KLHL31Q9H511 634 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 LHX9Q9NQ69 397 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 PRSS16Q9NQE7 514 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 RDH8Q9NYR8 311 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 MGAT4CQ9UBM8 478 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 SLC23A2Q9UGH3 650 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 MRTO4Q9UKD2 239 aaKnown RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 TMEM14AQ9Y6G1 99 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 U3KQ87 197 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 PRRC2BQ5JSZ5 2229 aaKnown RBP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 HEATR5BQ9P2D3 2071 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 A0A1B0GTQ1 180 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 PRAMEF27A3QJZ7 478 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 FAM183AA6NL82 134 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 GABARAPH6UMI1 98 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 KLF4O43474 513 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 CD3GP09693 182 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF888P0CJ79 500 aaPredicted RBP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 CALCBP10092 127 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 GDNFP39905 211 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 PPM1FP49593 454 aaPredicted RBP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 CAPZA1P52907 286 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 LY6DQ14210 128 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 FGL2Q14314 439 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 FGFBP1Q14512 234 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 CEBPEQ15744 281 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 TMEM69Q5SWH9 247 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 PMS2CLQ68D20 193 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ULK3Q6PHR2 472 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF704Q6ZNC4 412 aaPredicted RBP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 TMEM91Q6ZNR0 172 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 GALNT11Q8NCW6 608 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 BBS1Q8NFJ9 593 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 OR13C2Q8NGS9 318 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 OR14C36Q8NHC7 312 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 PELOQ9BRX2 385 aaKnown RBP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ZPBPQ9BS86 351 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 TWSG1Q9GZX9 223 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 PPA2Q9H2U2 334 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 Q9N2J8 555 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 SDHAF3Q9NRP4 125 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 NTMQ9P121 344 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 KIF25Q9UIL4 384 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ELF5Q9UKW6 265 aaPredicted RBP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 CES1P1Q9UKY3 287 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF281Q9Y2X9 895 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 OR10H1Q9Y4A9 318 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 HSPB2A8KAH6 182 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 SNRPGP15A8MWD9 76 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 CLDN4O14493 209 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 TSPAN9O75954 239 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 KAT7O95251 611 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 GPR75O95800 540 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 LALBAP00709 142 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 RENP00797 406 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 EGFP01133 1207 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 TFP02787 698 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 STATHP02808 62 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 CSF1P09603 554 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 FAM157BP0CG42 384 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 GABRA3P34903 492 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 TRHRP34981 398 aaPredicted RBP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 BLVRAP53004 296 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 DLX5P56178 289 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 SCAND1P57086 179 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 CXADRP78310 365 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 NTHL1P78549 312 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 FUT5Q11128 374 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 IL10RAQ13651 578 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 CCINQ13939 588 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 CAMK1Q14012 370 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 CDK5R1Q15078 307 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 HSPB2Q16082 182 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ALG10BQ5I7T1 473 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 DMKNQ6E0U4 476 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms