RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 TTKP33981 857 aa15.73■□□□□ 0.11
PNKP-225ENST00000636214 IDH3AP50213 366 aa15.73■□□□□ 0.11
PNKP-225ENST00000636214 AQP5P55064 265 aa15.73■□□□□ 0.11
PNKP-225ENST00000636214 IRX1P78414 480 aaPredicted RBP15.73■□□□□ 0.11
PNKP-225ENST00000636214 REEP3Q6NUK4 255 aa15.73■□□□□ 0.11
PNKP-225ENST00000636214 NFKBIDQ8NI38 313 aa15.73■□□□□ 0.11
PNKP-225ENST00000636214 RNF217Q8TC41 542 aa15.73■□□□□ 0.11
PNKP-225ENST00000636214 ZNF385AQ96PM9 386 aaKnown RBP15.73■□□□□ 0.11
PNKP-225ENST00000636214 ZNF607Q96SK3 696 aa15.73■□□□□ 0.11
PNKP-225ENST00000636214 RHNO1Q9BSD3 238 aa15.73■□□□□ 0.11
PNKP-225ENST00000636214 CACNG6Q9BXT2 260 aa15.73■□□□□ 0.11
PNKP-225ENST00000636214 REG4Q9BYZ8 158 aa15.73■□□□□ 0.11
PNKP-225ENST00000636214 RABEP2Q9H5N1 569 aa15.73■□□□□ 0.11
PNKP-225ENST00000636214 SLCO1B3Q9NPD5 702 aa15.73■□□□□ 0.11
PNKP-225ENST00000636214 CBLN4Q9NTU7 201 aa15.73■□□□□ 0.11
PNKP-225ENST00000636214 TMEM45AQ9NWC5 275 aa15.73■□□□□ 0.11
PNKP-225ENST00000636214 TMEM229AB2RXF0 380 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 INAFM1C9JVW0 142 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 ARAFP10398 606 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 BMP2P12643 396 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 ZNF43P17038 809 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 PTNP21246 168 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 SLC6A2P23975 617 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 UBE2NP61088 152 aaKnown RBP15.72■□□□□ 0.11
PNKP-225ENST00000636214 HOXC5Q00444 222 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 IL1RL1Q01638 556 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 CHRNB3Q05901 458 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 DMTNQ08495 405 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 SPOCK1Q08629 439 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 SQLEQ14534 574 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 RAB35Q15286 201 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 AGKQ53H12 422 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 LRIF1Q5T3J3 769 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 ZNF544Q6NX49 715 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 NIPAL3Q6P499 406 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 BLOC1S3Q6QNY0 202 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 C5orf46Q6UWT4 87 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 MFSD8Q8NHS3 518 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 EBF4Q9BQW3 602 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 OBP2BQ9NPH6 170 aa15.72■□□□□ 0.11
PNKP-225ENST00000636214 PRORSD1PA6NEY8 169 aa15.71■□□□□ 0.11
PNKP-225ENST00000636214 E7EQL1 145 aa15.71■□□□□ 0.11
PNKP-225ENST00000636214 AKAP8O43823 692 aaKnown RBP15.71■□□□□ 0.11
PNKP-225ENST00000636214 OR2T1O43869 369 aa15.71■□□□□ 0.11
PNKP-225ENST00000636214 SSX4O60224 188 aa15.71■□□□□ 0.11
PNKP-225ENST00000636214 CD8AP01732 235 aa15.71■□□□□ 0.11
PNKP-225ENST00000636214 PAX7P23759 505 aa15.71■□□□□ 0.11
PNKP-225ENST00000636214 RPS5P46782 204 aaKnown RBP15.71■□□□□ 0.11
PNKP-225ENST00000636214 CDK6Q00534 326 aa15.71■□□□□ 0.11
PNKP-225ENST00000636214 C1DQ13901 141 aaKnown RBP15.71■□□□□ 0.11
PNKP-225ENST00000636214 HMBOX1Q6NT76 420 aa15.71■□□□□ 0.11
PNKP-225ENST00000636214 CLEC2AQ6UVW9 174 aa15.71■□□□□ 0.11
PNKP-225ENST00000636214 ZIC4Q8N9L1 334 aa15.71■□□□□ 0.11
PNKP-225ENST00000636214 WDR31Q8NA23 367 aa15.71■□□□□ 0.11
PNKP-225ENST00000636214 BHLHE22Q8NFJ8 381 aaPredicted RBP15.71■□□□□ 0.11
PNKP-225ENST00000636214 DNAJA4Q8WW22 397 aaPredicted RBP15.71■□□□□ 0.11
PNKP-225ENST00000636214 SLC38A4Q969I6 547 aa15.71■□□□□ 0.11
PNKP-225ENST00000636214 ALKBH3Q96Q83 286 aaPredicted RBP15.71■□□□□ 0.11
PNKP-225ENST00000636214 C12orf10Q9HB07 376 aa15.71■□□□□ 0.11
PNKP-225ENST00000636214 GDF2Q9UK05 429 aaPredicted RBP15.71■□□□□ 0.11
PNKP-225ENST00000636214 ANGPT4Q9Y264 503 aa15.71■□□□□ 0.11
PNKP-225ENST00000636214 B3GALT5Q9Y2C3 310 aa15.71■□□□□ 0.11
PNKP-225ENST00000636214 AIM2O14862 343 aa15.7■□□□□ 0.1
PNKP-225ENST00000636214 NPIPB7O75200 414 aa15.7■□□□□ 0.1
PNKP-225ENST00000636214 SERPINB7O75635 380 aa15.7■□□□□ 0.1
PNKP-225ENST00000636214 PNMTP11086 282 aa15.7■□□□□ 0.1
PNKP-225ENST00000636214 SELENOPP49908 381 aa15.7■□□□□ 0.1
PNKP-225ENST00000636214 ATP4BP51164 291 aa15.7■□□□□ 0.1
PNKP-225ENST00000636214 SCARB2Q14108 478 aa15.7■□□□□ 0.1
PNKP-225ENST00000636214 DHRS4L2Q6PKH6 230 aa15.7■□□□□ 0.1
PNKP-225ENST00000636214 CREB3L2Q70SY1 520 aa15.7■□□□□ 0.1
PNKP-225ENST00000636214 LSRQ86X29 649 aaPredicted RBP15.7■□□□□ 0.1
PNKP-225ENST00000636214 FUNDC1Q8IVP5 155 aa15.7■□□□□ 0.1
PNKP-225ENST00000636214 MAPK1IP1LQ8NDC0 245 aa15.7■□□□□ 0.1
PNKP-225ENST00000636214 TMEM27Q9HBJ8 222 aa15.7■□□□□ 0.1
PNKP-225ENST00000636214 MOV10Q9HCE1 1003 aaKnown RBP15.7■□□□□ 0.1
PNKP-225ENST00000636214 INTS9Q9NV88 658 aaKnown RBP15.7■□□□□ 0.1
PNKP-225ENST00000636214 ARGLU1Q9NWB6 273 aaPredicted RBP15.7■□□□□ 0.1
PNKP-225ENST00000636214 SLC25A37Q9NYZ2 338 aa15.7■□□□□ 0.1
PNKP-225ENST00000636214 CHST2Q9Y4C5 530 aa15.7■□□□□ 0.1
PNKP-225ENST00000636214 PMF1-BGLAPU3KQ54 211 aa15.7■□□□□ 0.1
PNKP-225ENST00000636214 NDUFS7O75251 213 aa15.69■□□□□ 0.1
PNKP-225ENST00000636214 LGI1O95970 557 aa15.69■□□□□ 0.1
PNKP-225ENST00000636214 SH3BGRP55822 239 aaPredicted RBP15.69■□□□□ 0.1
PNKP-225ENST00000636214 RGS8P57771 180 aaPredicted RBP15.69■□□□□ 0.1
PNKP-225ENST00000636214 DSCR9P59020 149 aa15.69■□□□□ 0.1
PNKP-225ENST00000636214 MFSD13AQ14CX5 517 aa15.69■□□□□ 0.1
PNKP-225ENST00000636214 TBRG1Q3YBR2 411 aa15.69■□□□□ 0.1
PNKP-225ENST00000636214 HIKESHIQ53FT3 197 aa15.69■□□□□ 0.1
PNKP-225ENST00000636214 ALG10BQ5I7T1 473 aa15.69■□□□□ 0.1
PNKP-225ENST00000636214 FAM69AQ5T7M9 428 aa15.69■□□□□ 0.1
PNKP-225ENST00000636214 OR1K1Q8NGR3 316 aa15.69■□□□□ 0.1
PNKP-225ENST00000636214 EPYCQ99645 322 aa15.69■□□□□ 0.1
PNKP-225ENST00000636214 VAPAQ9P0L0 249 aa15.69■□□□□ 0.1
PNKP-225ENST00000636214 TESQ9UGI8 421 aaKnown RBP15.69■□□□□ 0.1
PNKP-225ENST00000636214 TRIM33Q9UPN9 1127 aa15.69■□□□□ 0.1
PNKP-225ENST00000636214 TRAV36DV7A0A075B6V5 113 aa15.68■□□□□ 0.1
PNKP-225ENST00000636214 A0A1B0GWA3 101 aa15.68■□□□□ 0.1
PNKP-225ENST00000636214 HMGB1P1B2RPK0 211 aaPredicted RBP15.68■□□□□ 0.1
PNKP-225ENST00000636214 ATP6V1G2-DDX39BF2Z307 99 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms