RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 RHBDD3Q9Y3P4 386 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 A0A1W2PRU2 124 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 HIDE1A8MVS5 230 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 WNT10BO00744 389 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 HAPLN1P10915 354 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 ACVR1BP36896 505 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 SELPLGQ14242 412 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 USP53Q70EK8 1073 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 ADAMTS19Q8TE59 1207 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 OR7D2Q96RA2 312 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 TTTY10Q9BZA0 68 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 ULBP3Q9BZM4 244 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 RAB6CQ9H0N0 254 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 WDR55Q9H6Y2 383 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 CHST7Q9NS84 486 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 MED17Q9NVC6 651 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 PADI3Q9ULW8 664 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 MED16Q9Y2X0 877 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 CFAP20Q9Y6A4 193 aaKnown RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 TMEM221A6NGB7 291 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 ANKRD61A6NGH8 418 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 H0YAE9 185 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 M0R296 226 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 UBE2L6O14933 153 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 MITFO75030 526 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 STSP08842 583 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 NDUFB7P17568 137 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 ELK1P19419 428 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 GABARAPL2P60520 117 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 FOXO4P98177 505 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 INTS5Q6P9B9 1019 aaKnown RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 BTLAQ7Z6A9 289 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 BCL2L2Q92843 193 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 PSMG2Q969U7 264 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 TMEM175Q9BSA9 504 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 PSMG3Q9BT73 122 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 SGPP1Q9BX95 441 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 OR51I2Q9H344 312 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 PLEKHF2Q9H8W4 249 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 TIMM9Q9Y5J7 89 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 NPTNQ9Y639 398 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 A0A087WZY1 265 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 TMEM238LA0A1B0GVL6 79 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 CD8B2A6NJW9 211 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 A6NJY4 79 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 ANKRD66B4E2M5 251 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 ACOT8O14734 319 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 FUCA1P04066 466 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 C7P10643 843 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 CD8BP10966 210 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 ACKR3P25106 362 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 GTF2BQ00403 316 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 ENDOGQ14249 297 aaKnown RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 MFSD5Q6N075 450 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 OR4F15Q8NGB8 312 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 OR51A7Q8NH64 312 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 BCL7CQ8WUZ0 217 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 B3GNT5Q9BYG0 378 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 RPF2Q9H7B2 306 aaKnown RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 ERVMER34-1Q9H9K5 563 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 INPP5EQ9NRR6 644 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 USP36Q9P275 1121 aaKnown RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 CLTCL1P53675 1640 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 H3BQ06 376 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 SLC16A5O15375 505 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ATXN1LP0C7T5 689 aaKnown RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ACP2P11117 423 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 HTR1EP28566 365 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 HNRNPH3P31942 346 aaKnown RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 BCL6P41182 706 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 AQP4P55087 323 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ADIRFQ15847 76 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ATP6V1FQ16864 119 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 RAB6CQ53S08 254 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ANKRD54Q6NXT1 300 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 RBPMS2Q6ZRY4 209 aaKnown RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ASRGL1Q7L266 308 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 DOK3Q7L591 496 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 C14orf80Q86SX3 495 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 CHDHQ8NE62 594 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 OR5M1Q8NGP8 315 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ABHD6Q9BV23 337 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ARHGAP39Q9C0H5 1083 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 NXF5Q9H1B4 397 aaKnown RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 AKIRIN1Q9H9L7 192 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 L2HGDHQ9H9P8 463 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 UCK1Q9HA47 277 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 AMBNQ9NP70 447 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 CD207Q9UJ71 328 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ATXN7L1Q9ULK2 861 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 HES2Q9Y543 173 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 SLCO1B1Q9Y6L6 691 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 URGCP-MRPS24S4R325 110 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 NUDT19A8MXV4 375 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 TOX3O15405 576 aaPredicted RBP5.63□□□□□ -1.51
SCN1A-212ENST00000636194 CTSAP10619 480 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 PEX2P28328 305 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 ARSDP51689 593 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 WNT7BP56706 349 aa5.63□□□□□ -1.51
SCN1A-212ENST00000636194 CLDN6P56747 220 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms