RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	SYT4	Q9H2B2	425 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ZNF442	Q9H7R0	627 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	HSPE1-MOB4	S4R3N1	261 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	PTPRQ	Q9UMZ3	2332 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	IGFBP1	P08833	259 aa	Predicted RBP	13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CRABP1	P29762	137 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	DCAF7	P61962	342 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TMEM201	Q5SNT2	666 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	BCL2L15	Q5TBC7	163 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	DPY19L4	Q7Z388	723 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	AMER3	Q8N944	861 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	EMC6	Q9BV81	110 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	FN3K	Q9H479	309 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997	STUB1	Q9UNE7	303 aa		13.21	□□□□□ -0.3
NEDD4L-238	ENST00000635997		A0A1W2PQL4	384 aa	Predicted RBP	13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TOX	O94900	526 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	DRD5	P21918	477 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SLC2A5	P22732	501 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CAV3	P56539	151 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	POU4F2	Q12837	409 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SMUG1	Q53HV7	270 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SFRP4	Q6FHJ7	346 aa	Predicted RBP	13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	LAS2	Q8IYD9	372 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SDF2	Q99470	211 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	DPAGT1	Q9H3H5	408 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SLC6A20	Q9NP91	592 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CD300A	Q9UGN4	299 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	PILRB	Q9UKJ0	227 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	GJE1	A6NN92	205 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	FXYD1	O00168	92 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CA5A	P35218	305 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TSPAN31	Q12999	210 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ILK	Q13418	452 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	PRSS41	Q7RTY9	318 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SLC37A3	Q8NCC5	494 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	GALNT11	Q8NCW6	608 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	NEDD4L	Q96PU5	975 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	MENT	Q9BUN1	341 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SMURF1	Q9HCE7	757 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ZNF337	Q9Y3M9	751 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TRAV18	A0A075B6X5	111 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	FXYD6-FXYD2	A0A087WZ82	144 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CD22	P20273	847 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	BSG	P35613	385 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	PIGA	P37287	484 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	NHLH1	Q02575	133 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SLC22A10	Q63ZE4	541 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ZNF585A	Q6P3V2	769 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ZNF565	Q8N9K5	539 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CLDN23	Q96B33	292 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997		Q96M85	177 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	FXYD6	Q9H0Q3	95 aa		13.2	□□□□□ -0.3
NEDD4L-238	ENST00000635997	LRRN3	E7EW58	273 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	MPIG6B	O95866	241 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	BMP4	P12644	408 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	FCAR	P24071	287 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TEAD1	P28347	426 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	MALL	Q13021	153 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SWI5	Q1ZZU3	235 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ZNF528	Q3MIS6	628 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	RFPL4B	Q6ZWI9	263 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TP53I13	Q8NBR0	393 aa	Predicted RBP	13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	OR5W2	Q8NH69	310 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CDH20	Q9HBT6	801 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CPNE5	Q9HCH3	593 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	KLHL9	Q9P2J3	617 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TES	Q9UGI8	421 aa	Known RBP	13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	KLHL21	Q9UJP4	597 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SNTB2	Q13425	540 aa	Known RBP	13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	PDE7A	Q13946	482 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	B3GNT8	Q7Z7M8	397 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SLITRK4	Q8IW52	837 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	SFTPA2	Q8IWL1	248 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	POGLUT1	Q8NBL1	392 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ASB12	Q8WXK4	309 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	GGH	Q92820	318 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	HOXB13	Q92826	284 aa	Predicted RBP	13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	B3GNT3	Q9Y2A9	372 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TCF20	Q9UGU0	1960 aa	Known RBP	13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997		D6RAR5	112 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	INMT-MINDY4	F8WBC2	141 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	PIP5K1C	O60331	668 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CRHBP	P24387	322 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	UQCRC1	P31930	480 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	CLDN6	P56747	220 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ISX	Q2M1V0	245 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	ACSM3	Q53FZ2	586 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	FAM205BP	Q63HN1	556 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	GDF7	Q7Z4P5	450 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	LINC01555	Q8NAE3	123 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	C16orf52	Q8NHV5	167 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	NGB	Q9NPG2	151 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	NPFFR2	Q9Y5X5	522 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	FAM208B	Q5VWN6	2430 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	TMED7-TICAM2	A0A0A6YYA0	188 aa		13.19	□□□□□ -0.3
NEDD4L-238	ENST00000635997	MEIS3P1	A6NDR6	274 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms