RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 GPM6AP51674 278 aa1.76□□□□□ -2.13
SRP54-214ENST00000630962 HSPA2P54652 639 aa1.76□□□□□ -2.13
SRP54-214ENST00000630962 HMGCS1Q01581 520 aa1.76□□□□□ -2.13
SRP54-214ENST00000630962 GNMTQ14749 295 aa1.76□□□□□ -2.13
SRP54-214ENST00000630962 LY6G6FQ5SQ64 297 aa1.76□□□□□ -2.13
SRP54-214ENST00000630962 SLC25A34Q6PIV7 304 aa1.76□□□□□ -2.13
SRP54-214ENST00000630962 ERASQ7Z444 233 aa1.76□□□□□ -2.13
SRP54-214ENST00000630962 UBALD2Q8IYN6 164 aa1.76□□□□□ -2.13
SRP54-214ENST00000630962 OR4F15Q8NGB8 312 aa1.76□□□□□ -2.13
SRP54-214ENST00000630962 OR4D9Q8NGE8 314 aa1.76□□□□□ -2.13
SRP54-214ENST00000630962 CD300LFQ8TDQ1 290 aa1.76□□□□□ -2.13
SRP54-214ENST00000630962 RIT2Q99578 217 aa1.76□□□□□ -2.13
SRP54-214ENST00000630962 OMDQ99983 421 aa1.76□□□□□ -2.13
SRP54-214ENST00000630962 DEFB127Q9H1M4 99 aa1.76□□□□□ -2.13
SRP54-214ENST00000630962 LINC00597Q9H2U6 94 aa1.76□□□□□ -2.13
SRP54-214ENST00000630962 KCNIP1Q9NZI2 227 aa1.76□□□□□ -2.13
SRP54-214ENST00000630962 OPN4Q9UHM6 478 aa1.76□□□□□ -2.13
SRP54-214ENST00000630962 AK6Q9Y3D8 172 aaKnown RBP1.76□□□□□ -2.13
SRP54-214ENST00000630962 YTHDF2Q9Y5A9 579 aaKnown RBP1.76□□□□□ -2.13
SRP54-214ENST00000630962 CLCA3PQ9Y6N3 262 aa1.76□□□□□ -2.13
SRP54-214ENST00000630962 IGKV1D-8A0A087WSZ0 117 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 KRT87PA6NCN2 255 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 VSTM2BA6NLU5 285 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 F5H6K3 240 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 TAPBPO15533 448 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 PRPSAP2O60256 369 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 STAMBPO95630 424 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 SMIM10L1P0DMW3 83 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 MUC1P15941 1255 aaPredicted RBP1.75□□□□□ -2.13
SRP54-214ENST00000630962 GAP43P17677 238 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 PSMC3P17980 439 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 POLR2EP19388 210 aaKnown RBP1.75□□□□□ -2.13
SRP54-214ENST00000630962 IMPDH1P20839 514 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 NT5EP21589 574 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 EFNB2P52799 333 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 NUCB2P80303 420 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 KLRC3Q07444 240 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 KIAA0087Q14695 138 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 ZNF836Q6ZNA1 936 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 NEGR1Q7Z3B1 354 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 PEX26Q7Z412 305 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 ZDHHC21Q8IVQ6 265 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 SYT14Q8NB59 555 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 OR4K14Q8NGD5 310 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 OR5L2Q8NGL0 311 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 OR2G3Q8NGZ4 309 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 ACOT11Q8WXI4 607 aaPredicted RBP1.75□□□□□ -2.13
SRP54-214ENST00000630962 SMIM10Q96HG1 83 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 BMFQ96LC9 184 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 TMEM237Q96Q45 408 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 ZNF2Q9BSG1 426 aaPredicted RBP1.75□□□□□ -2.13
SRP54-214ENST00000630962 TMEM117Q9H0C3 514 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 ING2Q9H160 280 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 DPH5Q9H2P9 285 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 SRMSQ9H3Y6 488 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 CLMPQ9H6B4 373 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 REEP4Q9H6H4 257 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 INPP5EQ9NRR6 644 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 QPCTLQ9NXS2 382 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 TMCO1Q9UM00 188 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 RPH3ALQ9UNE2 315 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 ZNF835Q9Y2P0 537 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 HEBP2Q9Y5Z4 205 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 PLA2R1Q13018 1463 aa1.75□□□□□ -2.13
SRP54-214ENST00000630962 PFKFB2O60825 505 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 SUPT3HO75486 399 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 UBTFL1P0CB47 393 aaPredicted RBP1.74□□□□□ -2.13
SRP54-214ENST00000630962 CYP2F1P24903 491 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 MAPK3P27361 379 aaPredicted RBP1.74□□□□□ -2.13
SRP54-214ENST00000630962 GDI1P31150 447 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 MAP3K8P41279 467 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 RABIFP47224 123 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 ERVK-25P63136 954 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 PRSS8Q16651 343 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 SLC25A52Q3SY17 297 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 GPRC6AQ5T6X5 926 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 BLOC1S2Q6QNY1 142 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 KIAA1328Q86T90 577 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 SLC26A11Q86WA9 606 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 ITCHQ96J02 903 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 RNF157Q96PX1 679 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 CCT7Q99832 543 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 KRT23Q9C075 422 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 RSPH9Q9H1X1 276 aaPredicted RBP1.74□□□□□ -2.13
SRP54-214ENST00000630962 ZNF430Q9H8G1 570 aaPredicted RBP1.74□□□□□ -2.13
SRP54-214ENST00000630962 POPDC2Q9HBU9 364 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 CLCF1Q9UBD9 225 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 MRPS33Q9Y291 106 aaKnown RBP1.74□□□□□ -2.13
SRP54-214ENST00000630962 OR10H1Q9Y4A9 318 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 MFHAS1Q9Y4C4 1052 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 N6AMT1Q9Y5N5 214 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 LRP4O75096 1905 aa1.74□□□□□ -2.13
SRP54-214ENST00000630962 SF3B1O75533 1304 aaKnown RBP eCLIP1.73□□□□□ -2.13
SRP54-214ENST00000630962 PRSS37A4D1T9 235 aa1.73□□□□□ -2.13
SRP54-214ENST00000630962 ZSCAN12O43309 604 aa1.73□□□□□ -2.13
SRP54-214ENST00000630962 OR1F1O43749 312 aa1.73□□□□□ -2.13
SRP54-214ENST00000630962 VAMP5O95183 116 aa1.73□□□□□ -2.13
SRP54-214ENST00000630962 AP2A1O95782 977 aa1.73□□□□□ -2.13
SRP54-214ENST00000630962 HSMCR30P0CW71 290 aa1.73□□□□□ -2.13
SRP54-214ENST00000630962 NPY1RP25929 384 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms