RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 GPR139Q6DWJ6 353 aa20.04■□□□□ 0.8
PNKP-220ENST00000627232 VASH1Q7L8A9 365 aaPredicted RBP20.04■□□□□ 0.8
PNKP-220ENST00000627232 JAZF1Q86VZ6 243 aa20.04■□□□□ 0.8
PNKP-220ENST00000627232 MARCH9Q86YJ5 346 aa20.04■□□□□ 0.8
PNKP-220ENST00000627232 DUSP19Q8WTR2 217 aa20.04■□□□□ 0.8
PNKP-220ENST00000627232 TMEM234Q8WY98 164 aa20.04■□□□□ 0.8
PNKP-220ENST00000627232 MRPL48Q96GC5 212 aaKnown RBP20.04■□□□□ 0.8
PNKP-220ENST00000627232 Q96M85 177 aa20.04■□□□□ 0.8
PNKP-220ENST00000627232 NECAB3Q96P71 396 aaPredicted RBP20.04■□□□□ 0.8
PNKP-220ENST00000627232 MESP1Q9BRJ9 268 aa20.04■□□□□ 0.8
PNKP-220ENST00000627232 GPN3Q9UHW5 284 aaPredicted RBP20.04■□□□□ 0.8
PNKP-220ENST00000627232 TMED7Q9Y3B3 224 aa20.04■□□□□ 0.8
PNKP-220ENST00000627232 PCDHGB2Q9Y5G2 931 aa20.04■□□□□ 0.8
PNKP-220ENST00000627232 TEX13CA0A0J9YWL9 993 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 A0A1W2PQL4 384 aaPredicted RBP20.03■□□□□ 0.8
PNKP-220ENST00000627232 SLC35F4A4IF30 521 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 ANKUB1A6NFN9 424 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 MAGEB3O15480 346 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 LRRTM2O43300 516 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 NPIPB7O75200 414 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 SNX4O95219 450 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 TNFSF8P32971 234 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 RPS5P46782 204 aaKnown RBP20.03■□□□□ 0.8
PNKP-220ENST00000627232 ACTA2P62736 377 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 ACTG2P63267 376 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 MXD1Q05195 221 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 HNRNPA0Q13151 305 aaKnown RBP20.03■□□□□ 0.8
PNKP-220ENST00000627232 OXA1LQ15070 435 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 TRIM16LQ309B1 348 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 LEG1Q6P5S2 330 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 PRR23CQ6ZRP0 262 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 MAMDC2Q7Z304 686 aaPredicted RBP20.03■□□□□ 0.8
PNKP-220ENST00000627232 SLC35F2Q8IXU6 374 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 SYS1Q8N2H4 156 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 STK35Q8TDR2 534 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 C4orf36Q96KX1 117 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 SLC30A2Q9BRI3 323 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 KCNN2Q9H2S1 579 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 RERGLQ9H628 205 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 PLEKHB1Q9UF11 243 aaPredicted RBP20.03■□□□□ 0.8
PNKP-220ENST00000627232 ZMIZ1Q9ULJ6 1067 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 MOKQ9UQ07 419 aa20.03■□□□□ 0.8
PNKP-220ENST00000627232 C17orf51A8MQB3 221 aa20.02■□□□□ 0.8
PNKP-220ENST00000627232 A8MVM7 634 aa20.02■□□□□ 0.8
PNKP-220ENST00000627232 GMFGO60234 142 aa20.02■□□□□ 0.8
PNKP-220ENST00000627232 SUSD5O60279 629 aa20.02■□□□□ 0.8
PNKP-220ENST00000627232 LDOC1O95751 146 aaPredicted RBP20.02■□□□□ 0.8
PNKP-220ENST00000627232 TFP02787 698 aa20.02■□□□□ 0.8
PNKP-220ENST00000627232 KLK3P07288 261 aaPredicted RBP20.02■□□□□ 0.8
PNKP-220ENST00000627232 CLEC2LP0C7M8 214 aa20.02■□□□□ 0.8
PNKP-220ENST00000627232 ACP1P24666 158 aa20.02■□□□□ 0.8
PNKP-220ENST00000627232 TMED10P49755 219 aaKnown RBP20.02■□□□□ 0.8
PNKP-220ENST00000627232 DLX5P56178 289 aa20.02■□□□□ 0.8
PNKP-220ENST00000627232 FBXW4P57775 412 aa20.02■□□□□ 0.8
PNKP-220ENST00000627232 HSF2Q03933 536 aa20.02■□□□□ 0.8
PNKP-220ENST00000627232 COL28A1Q2UY09 1125 aa20.02■□□□□ 0.8
PNKP-220ENST00000627232 DBX2Q6ZNG2 339 aa20.02■□□□□ 0.8
PNKP-220ENST00000627232 ADGRG3Q86Y34 549 aa20.02■□□□□ 0.8
PNKP-220ENST00000627232 EXD3Q8N9H8 876 aa20.02■□□□□ 0.8
PNKP-220ENST00000627232 LSM14AQ8ND56 463 aaKnown RBP20.02■□□□□ 0.8
PNKP-220ENST00000627232 ST8SIA1Q92185 356 aa20.02■□□□□ 0.8
PNKP-220ENST00000627232 AP3S1Q92572 193 aa20.02■□□□□ 0.8
PNKP-220ENST00000627232 TPK1Q9H3S4 243 aa20.02■□□□□ 0.8
PNKP-220ENST00000627232 SIRT4Q9Y6E7 314 aaPredicted RBP20.02■□□□□ 0.8
PNKP-220ENST00000627232 LOC102723996A0A087X1L8 192 aa20.02■□□□□ 0.79
PNKP-220ENST00000627232 TMEM72A0PK05 275 aa20.02■□□□□ 0.79
PNKP-220ENST00000627232 J3QLW9 94 aa20.02■□□□□ 0.79
PNKP-220ENST00000627232 ZNF354AO60765 605 aaPredicted RBP20.02■□□□□ 0.79
PNKP-220ENST00000627232 SP9P0CG40 484 aa20.02■□□□□ 0.79
PNKP-220ENST00000627232 ZNF19P17023 458 aa20.02■□□□□ 0.79
PNKP-220ENST00000627232 F8A1P23610 371 aa20.02■□□□□ 0.79
PNKP-220ENST00000627232 CDKN2AP42771 156 aaKnown RBP20.02■□□□□ 0.79
PNKP-220ENST00000627232 DBPQ10586 325 aaPredicted RBP20.02■□□□□ 0.79
PNKP-220ENST00000627232 TMEM91Q6ZNR0 172 aa20.02■□□□□ 0.79
PNKP-220ENST00000627232 C16orf47Q6ZP98 133 aaPredicted RBP20.02■□□□□ 0.79
PNKP-220ENST00000627232 SYT14Q8NB59 555 aa20.02■□□□□ 0.79
PNKP-220ENST00000627232 OR6S1Q8NH40 331 aa20.02■□□□□ 0.79
PNKP-220ENST00000627232 PTDSS2Q9BVG9 487 aa20.02■□□□□ 0.79
PNKP-220ENST00000627232 HDHD5Q9BXW7 423 aa20.02■□□□□ 0.79
PNKP-220ENST00000627232 GRHPRQ9UBQ7 328 aa20.02■□□□□ 0.79
PNKP-220ENST00000627232 CMAHPQ9Y471 501 aa20.02■□□□□ 0.79
PNKP-220ENST00000627232 PCNX3Q9H6A9 2034 aa20.01■□□□□ 0.79
PNKP-220ENST00000627232 PFDN1O60925 122 aa20.01■□□□□ 0.79
PNKP-220ENST00000627232 ZNF28P17035 718 aa20.01■□□□□ 0.79
PNKP-220ENST00000627232 OR12D2P58182 307 aa20.01■□□□□ 0.79
PNKP-220ENST00000627232 SGCBQ16585 318 aa20.01■□□□□ 0.79
PNKP-220ENST00000627232 CDONQ4KMG0 1287 aa20.01■□□□□ 0.79
PNKP-220ENST00000627232 FAM69AQ5T7M9 428 aa20.01■□□□□ 0.79
PNKP-220ENST00000627232 NEIL3Q8TAT5 605 aa20.01■□□□□ 0.79
PNKP-220ENST00000627232 SLC22A8Q8TCC7 542 aa20.01■□□□□ 0.79
PNKP-220ENST00000627232 ZPLD1Q8TCW7 415 aa20.01■□□□□ 0.79
PNKP-220ENST00000627232 THAP3Q8WTV1 239 aaPredicted RBP20.01■□□□□ 0.79
PNKP-220ENST00000627232 ABTB1Q969K4 478 aaPredicted RBP20.01■□□□□ 0.79
PNKP-220ENST00000627232 PPP1R14BQ96C90 147 aa20.01■□□□□ 0.79
PNKP-220ENST00000627232 TRAPPC4Q9Y296 219 aa20.01■□□□□ 0.79
PNKP-220ENST00000627232 MPLP40238 635 aa20■□□□□ 0.79
PNKP-220ENST00000627232 KRR1Q13601 381 aaKnown RBP20■□□□□ 0.79
PNKP-220ENST00000627232 LINC01590Q5TEZ4 76 aa20■□□□□ 0.79
PNKP-220ENST00000627232 DMKNQ6E0U4 476 aaPredicted RBP20■□□□□ 0.79
PNKP-220ENST00000627232 LYPD8Q6UX82 237 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms