RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 CARM1Q86X55 608 aa9.56□□□□□ -0.88
DDX41-218ENST00000625286 VRK2Q86Y07 508 aa9.56□□□□□ -0.88
DDX41-218ENST00000625286 WDFY1Q8IWB7 410 aa9.56□□□□□ -0.88
DDX41-218ENST00000625286 CLIP4Q8N3C7 705 aa9.56□□□□□ -0.88
DDX41-218ENST00000625286 SVOPLQ8N434 492 aa9.56□□□□□ -0.88
DDX41-218ENST00000625286 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.56□□□□□ -0.88
DDX41-218ENST00000625286 PNPT1Q8TCS8 783 aaKnown RBP9.56□□□□□ -0.88
DDX41-218ENST00000625286 OBP2BQ9NPH6 170 aa9.56□□□□□ -0.88
DDX41-218ENST00000625286 ADPRHL2Q9NX46 363 aa9.56□□□□□ -0.88
DDX41-218ENST00000625286 BTNL2Q9UIR0 455 aa9.56□□□□□ -0.88
DDX41-218ENST00000625286 CCDC154A6NI56 674 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 FTCDNL1E5RQL4 147 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 FRS3O43559 492 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 PDE5AO76074 875 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 ZNF432O94892 652 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 VENTXO95231 258 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 CRYAAP02489 173 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 IL7RP16871 459 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 MAP2K6P52564 334 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 ARF1P84077 181 aaKnown RBP9.55□□□□□ -0.88
DDX41-218ENST00000625286 EGR4Q05215 589 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 MPP2Q14168 576 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 GSTA3Q16772 222 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 PHYHD1Q5SRE7 291 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 TMEM225Q6GV28 225 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 NIPAL3Q6P499 406 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 NUDCD3Q8IVD9 361 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 CDK20Q8IZL9 346 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 ZNF786Q8N393 782 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 NUP37Q8NFH4 326 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 MAGEE2Q8TD90 523 aaPredicted RBP9.55□□□□□ -0.88
DDX41-218ENST00000625286 WDR60Q8WVS4 1066 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 ZIM3Q96PE6 472 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 SNX18Q96RF0 628 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 PTDSS2Q9BVG9 487 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 PIF1Q9H611 641 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 MYOZ1Q9NP98 299 aaPredicted RBP9.55□□□□□ -0.88
DDX41-218ENST00000625286 PNPOQ9NVS9 261 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 B3GAT1Q9P2W7 334 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 TMEFF2Q9UIK5 374 aaPredicted RBP9.55□□□□□ -0.88
DDX41-218ENST00000625286 DSPPQ9NZW4 1301 aa9.55□□□□□ -0.88
DDX41-218ENST00000625286 IGHV2OR16-5A0A0B4J2B6 119 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 SH3PXD2BA1X283 911 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 A8MVM7 634 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 ZNF587BE7ETH6 402 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 E9PBE3 544 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 hCG_2039718K7EN88 272 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 WNT9BO14905 357 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 TCF21O43680 179 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 DBIP07108 87 aaKnown RBP9.54□□□□□ -0.88
DDX41-218ENST00000625286 TFPTP0C1Z6 253 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 CBR1P16152 277 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 HNF1AP20823 631 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 CXCR1P25024 350 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 APEX1P27695 318 aaKnown RBP9.54□□□□□ -0.88
DDX41-218ENST00000625286 CFPP27918 469 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 S100A3P33764 101 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 CDH15P55291 814 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 ABCE1P61221 599 aaKnown RBP9.54□□□□□ -0.88
DDX41-218ENST00000625286 HOXC5Q00444 222 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 ROR2Q01974 943 aaKnown RBP9.54□□□□□ -0.88
DDX41-218ENST00000625286 RUNX1T1Q06455 604 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 CHI3L2Q15782 390 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 C3orf36Q3SXR2 165 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 RPS26P11Q5JNZ5 115 aaPredicted RBP9.54□□□□□ -0.88
DDX41-218ENST00000625286 C1orf140Q5VVS0 124 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 LIPNQ5VXI9 398 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 KLHL24Q6TFL4 600 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 ZNF621Q6ZSS3 439 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 MEX3DQ86XN8 651 aaKnown RBP9.54□□□□□ -0.88
DDX41-218ENST00000625286 CADM2Q8N3J6 435 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 RIBC1Q8N443 379 aaPredicted RBP9.54□□□□□ -0.88
DDX41-218ENST00000625286 RFLNBQ8N5W9 214 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 FAM169BQ8N8A8 192 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 ZNF540Q8NDQ6 660 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 VPS37AQ8NEZ2 397 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 ZNF75AQ96N20 296 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 NUF2Q9BZD4 464 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 PLA2G12AQ9BZM1 189 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 LINC00470Q9BZP3 86 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 NOX3Q9HBY0 568 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 RAP2CQ9Y3L5 183 aa9.54□□□□□ -0.88
DDX41-218ENST00000625286 RPL36A-HNRNPH2H7BZ11 118 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 KRT33AO76009 404 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 SERPINE1P05121 402 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 ADRA2AP08913 450 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 NR2F1P10589 423 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 PNMTP11086 282 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 LBPP18428 481 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 NPR2P20594 1047 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 COL8A2P25067 703 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 RPL14P50914 215 aaKnown RBP9.53□□□□□ -0.88
DDX41-218ENST00000625286 CHN2P52757 468 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 CLDN17P56750 224 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 UBE2NP61088 152 aaKnown RBP9.53□□□□□ -0.88
DDX41-218ENST00000625286 HPCAP84074 193 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 CCNIQ14094 377 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 ADRM1Q16186 407 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 ELFN2Q5R3F8 820 aa9.53□□□□□ -0.88
DDX41-218ENST00000625286 WBP2NLQ6ICG8 309 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms