RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 B3GAT1Q9P2W7 334 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 SLC7A8Q9UHI5 535 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 EMC9Q9Y3B6 208 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 FLNBO75369 2602 aaKnown RBP12.72□□□□□ -0.37
CBWD3-217ENST00000621474 PRR14LQ5THK1 2151 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 ZNF724A8MTY0 619 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 M0R082 166 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 KPNA4O00629 521 aaPredicted RBP12.71□□□□□ -0.37
CBWD3-217ENST00000621474 MSTNO14793 375 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 ATP5HO75947 161 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 CBLP22681 906 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 GRPRP30550 384 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 RBM34P42696 430 aaKnown RBP12.71□□□□□ -0.37
CBWD3-217ENST00000621474 ST3GAL3Q11203 375 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 FOXD4Q12950 439 aaPredicted RBP12.71□□□□□ -0.37
CBWD3-217ENST00000621474 ZNF74Q16587 644 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 TTC33Q6PID6 262 aaPredicted RBP12.71□□□□□ -0.37
CBWD3-217ENST00000621474 SLC46A3Q7Z3Q1 461 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 MCEMP1Q8IX19 187 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 ZNF610Q8N9Z0 462 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 ZNF417Q8TAU3 575 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 PIGXQ8TBF5 258 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 DHRS1Q96LJ7 313 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 ZNF587Q96SQ5 575 aaPredicted RBP12.71□□□□□ -0.37
CBWD3-217ENST00000621474 EPYCQ99645 322 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 LRMDAQ9H2I8 198 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 NMNAT1Q9HAN9 279 aaPredicted RBP12.71□□□□□ -0.37
CBWD3-217ENST00000621474 IL1RAPQ9NPH3 570 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 FLVCR1Q9Y5Y0 555 aa12.71□□□□□ -0.37
CBWD3-217ENST00000621474 ANKHD1Q8IWZ3 2542 aaKnown RBP12.71□□□□□ -0.37
CBWD3-217ENST00000621474 SMNDC1O75940 238 aaKnown RBP eCLIP12.7□□□□□ -0.38
CBWD3-217ENST00000621474 MT-ND1P03886 318 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 RHCEP18577 417 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 MAGEA2P43356 314 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 CTBP2P56545 445 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 TRAP1Q12931 704 aaKnown RBP12.7□□□□□ -0.38
CBWD3-217ENST00000621474 MTX3Q5HYI7 312 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 EEF1A1P5Q5VTE0 462 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 TFAP2EQ6VUC0 442 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 ASRGL1Q7L266 308 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 KDM8Q8N371 416 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 LRRC17Q8N6Y2 441 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 ZIC4Q8N9L1 334 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 PIK3C3Q8NEB9 887 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 TMEM239Q8WW34 195 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 ZNF385AQ96PM9 386 aaKnown RBP12.7□□□□□ -0.38
CBWD3-217ENST00000621474 NAA11Q9BSU3 229 aaPredicted RBP12.7□□□□□ -0.38
CBWD3-217ENST00000621474 ENKD1Q9H0I2 346 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 C12orf49Q9H741 205 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 GALNT8Q9NY28 637 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.7□□□□□ -0.38
CBWD3-217ENST00000621474 POMPQ9Y244 141 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 CSMD2Q7Z408 3487 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 A0A087WUU8 490 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 ENO4A6NNW6 628 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 MS4A18H0YCH9 400 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 PIP5K1CO60331 668 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 CH25HO95992 272 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 IGF2P01344 180 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 ASAH2BP0C7U1 165 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 CCKARP32238 428 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 RASSF2P50749 326 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 MS4A18Q3C1V0 323 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 TMEM201Q5SNT2 666 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.7□□□□□ -0.38
CBWD3-217ENST00000621474 OR9K2Q8NGE7 335 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 SLC7A13Q8TCU3 470 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 SEPHS2Q99611 448 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 FUZQ9BT04 418 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 FNDC11Q9BVV2 318 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 SF3B5Q9BWJ5 86 aaKnown RBP12.7□□□□□ -0.38
CBWD3-217ENST00000621474 CHST11Q9NPF2 352 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 PROCRQ9UNN8 238 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 B3GALT5Q9Y2C3 310 aa12.7□□□□□ -0.38
CBWD3-217ENST00000621474 DCHS2Q6V1P9 2916 aa12.69□□□□□ -0.38
CBWD3-217ENST00000621474 CELSR2Q9HCU4 2923 aa12.69□□□□□ -0.38
CBWD3-217ENST00000621474 A0A1W2PRQ8 180 aa12.69□□□□□ -0.38
CBWD3-217ENST00000621474 HPRP00739 348 aa12.69□□□□□ -0.38
CBWD3-217ENST00000621474 MT-ATP6P00846 226 aa12.69□□□□□ -0.38
CBWD3-217ENST00000621474 SNTB1Q13884 538 aaKnown RBP12.69□□□□□ -0.38
CBWD3-217ENST00000621474 DGCR6Q14129 220 aa12.69□□□□□ -0.38
CBWD3-217ENST00000621474 TRAM2Q15035 370 aa12.69□□□□□ -0.38
CBWD3-217ENST00000621474 POU4F3Q15319 338 aa12.69□□□□□ -0.38
CBWD3-217ENST00000621474 TBPL2Q6SJ96 375 aa12.69□□□□□ -0.38
CBWD3-217ENST00000621474 NHLRC1Q6VVB1 395 aa12.69□□□□□ -0.38
CBWD3-217ENST00000621474 H1FNTQ75WM6 255 aaPredicted RBP12.69□□□□□ -0.38
CBWD3-217ENST00000621474 PIWIL3Q7Z3Z3 882 aaKnown RBP12.69□□□□□ -0.38
CBWD3-217ENST00000621474 GPAT4Q86UL3 456 aa12.69□□□□□ -0.38
CBWD3-217ENST00000621474 EPHX4Q8IUS5 362 aa12.69□□□□□ -0.38
CBWD3-217ENST00000621474 ADPRHL1Q8NDY3 354 aa12.69□□□□□ -0.38
CBWD3-217ENST00000621474 RNASE6Q93091 150 aaKnown RBP12.69□□□□□ -0.38
CBWD3-217ENST00000621474 UTP4Q969X6 686 aaKnown RBP12.69□□□□□ -0.38
CBWD3-217ENST00000621474 HS6ST2Q96MM7 605 aa12.69□□□□□ -0.38
CBWD3-217ENST00000621474 TACO1Q9BSH4 297 aaKnown RBP12.69□□□□□ -0.38
CBWD3-217ENST00000621474 RBM24Q9BX46 236 aaKnown RBP12.69□□□□□ -0.38
CBWD3-217ENST00000621474 FKRPQ9H9S5 495 aa12.69□□□□□ -0.38
CBWD3-217ENST00000621474 MRPL39Q9NYK5 338 aaKnown RBP12.69□□□□□ -0.38
CBWD3-217ENST00000621474 CORINQ9Y5Q5 1042 aa12.69□□□□□ -0.38
CBWD3-217ENST00000621474 CSMD1Q96PZ7 3565 aa12.68□□□□□ -0.38
CBWD3-217ENST00000621474 VAMP5O95183 116 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms