RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 AMER3Q8N944 861 aa7.65□□□□□ -1.18
PTPDC1-204ENST00000620992 ANKRD53Q8N9V6 530 aa7.65□□□□□ -1.18
PTPDC1-204ENST00000620992 MICU1Q9BPX6 476 aa7.65□□□□□ -1.18
PTPDC1-204ENST00000620992 TXNL4BQ9NX01 149 aaKnown RBP7.65□□□□□ -1.18
PTPDC1-204ENST00000620992 PAQR5Q9NXK6 330 aaPredicted RBP7.65□□□□□ -1.18
PTPDC1-204ENST00000620992 MED11Q9P086 117 aa7.65□□□□□ -1.18
PTPDC1-204ENST00000620992 TDRD6O60522 2096 aaKnown RBP7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 PEX14O75381 377 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 MPIG6BO95866 241 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 SLC2A1P11166 492 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 GIPRP48546 466 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 RIDAP52758 137 aaKnown RBP7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 AP3S2P59780 193 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 SNRPGP62308 76 aaKnown RBP7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 PSPHP78330 225 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 DCDP81605 110 aaKnown RBP7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 IFITM2Q01629 132 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 MESP2Q0VG99 397 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 SLC22A6Q4U2R8 563 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 NANOGP1Q8N7R0 232 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 OR52I1Q8NGK6 324 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 OR6T1Q8NGN1 323 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 OR2T4Q8NH00 348 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 TMEM239Q8WW34 195 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 NAA11Q9BSU3 229 aaPredicted RBP7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 EMC6Q9BV81 110 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 SLC22A4Q9H015 551 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 OR14J1Q9UGF5 321 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 GLS2Q9UI32 602 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 COLQQ9Y215 455 aaPredicted RBP7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 AK6Q9Y3D8 172 aaKnown RBP7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 PCYT1BQ9Y5K3 369 aaPredicted RBP7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 WDR87Q6ZQQ6 2873 aa7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 HELZP42694 1942 aaKnown RBP7.65□□□□□ -1.19
PTPDC1-204ENST00000620992 PPM1BO75688 479 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 GATBO75879 557 aaKnown RBP7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 HTR3BO95264 441 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 PNMTP11086 282 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 GTF2F2P13984 249 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 BCL2A1Q16548 175 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 MRPL2Q5T653 305 aaKnown RBP7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 SFRP4Q6FHJ7 346 aaPredicted RBP7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 ZNF585AQ6P3V2 769 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 HAGHLQ6PII5 290 aaPredicted RBP7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 LCTLQ6UWM7 567 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 YRDCQ86U90 279 aaKnown RBP7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 ZNF808Q8N4W9 903 aaPredicted RBP7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 OR6F1Q8NGZ6 308 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 BPIFA2Q96DR5 249 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 PELOQ9BRX2 385 aaKnown RBP7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 EDEM2Q9BV94 578 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 DEFB127Q9H1M4 99 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 SLC25A19Q9HC21 320 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 A4GALTQ9NPC4 353 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 KCND3Q9UK17 655 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 RHBDD3Q9Y3P4 386 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 PLXND1Q9Y4D7 1925 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 LOC105369274A0A096LPK9 316 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 LOC102723532A0A0G2JNH3 316 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 SOD1P00441 154 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 PIPP12273 146 aaPredicted RBP7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 OPRD1P41143 372 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 GLP1RP43220 463 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 RPS25P62851 125 aaKnown RBP7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 MLLT11Q13015 90 aaPredicted RBP7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 TRMT12Q53H54 448 aaKnown RBP7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 SYT14P1Q58G82 188 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 XKRXQ6PP77 449 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 OR4N4Q8N0Y3 316 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 S100A16Q96FQ6 103 aaKnown RBP7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 OR7D2Q96RA2 312 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 TMEM246Q9BRR3 403 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 MS4A8Q9BY19 250 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 ZNF106Q9H2Y7 1883 aaKnown RBP7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 KLHL9Q9P2J3 617 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 DKK3Q9UBP4 350 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 ORC5O43913 435 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 SRFP11831 508 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 SEC61A1P61619 476 aaKnown RBP7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 BTG2P78543 158 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 CDK10Q15131 360 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 ZNF79Q15937 498 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 TMEM44Q2T9K0 475 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 CDNFQ49AH0 187 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 VASNQ6EMK4 673 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 TRILQ7L0X0 811 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 ABHD12BQ7Z5M8 362 aaPredicted RBP7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 COQ10AQ96MF6 247 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 HS6ST2Q96MM7 605 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 TIMM29Q9BSF4 260 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 OR2B2Q9GZK3 357 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 ZNF160Q9HCG1 818 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 NDUFB11Q9NX14 153 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 WSB2Q9NYS7 404 aaPredicted RBP7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 KLHL13Q9P2N7 655 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 MCTS1Q9ULC4 181 aaKnown RBP7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 CBLCQ9ULV8 474 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 V9GYH0 126 aa7.64□□□□□ -1.19
PTPDC1-204ENST00000620992 ZNF407Q9C0G0 2248 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms